KEGG   Herbaspirillum sp. meg3: hmeg3_09805
Entry
hmeg3_09805       CDS       T05024                                 
Name
(GenBank) DNA repair protein RadA
  KO
K04485  DNA repair protein RadA/Sms
Organism
hee  Herbaspirillum sp. meg3
Brite
KEGG Orthology (KO) [BR:hee00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hee03400]
    hmeg3_09805
DNA repair and recombination proteins [BR:hee03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     hmeg3_09805
SSDB
Motif
Pfam: ATPase AAA_25 Zn_ribbon_LapB DnaB_C AAA_22 Lon_C AAA_24 AAA_16 GvpD_P-loop ChlI SLFN-g3_helicase RecA AAA AAA_14 DUF7125 nSTAND3 NTPase_1 ATPase_2 CobU DUF7129 AAA_5 ABC_tran AAA_28 NB-ARC AAA_29
Other DBs
NCBI-ProteinID: ASU38561
UniProt: A0A223P9J0
LinkDB
Position
2153465..2154841
AA seq 458 aa
MAKAKTNYTCTECGGISNKWAGQCPACGQWNTLVETLVEPVSANRYSNQHQGLAQTAPVL
SLVDIEAIDVPRFGTGIEEFDRVLGGGLVPGGVVLIGGDPGIGKSTLLLQALANISKLKH
VLYVSGEESGSQIALRAKRLAVDAKDLKLQAEIQLEKILSTLAEHKPDVAVIDSIQTVYS
DALTSAPGSVAQVRECAAQLTRFAKTSDTTIIMVGHVTKEGALAGPRVLEHIVDTVLYFE
GDTHSSFRLVRAFKNRFGAVNELGVFAMTEKGLKGVSNPSALFLSQHDSQVPGSCVMVTQ
EGTRPLLVEIQALVDSSHVPNARRLSVGLEQNRLAMLLAVLHRHAGIAAFDQDVFINAVG
GVKITEPAADLAVLLAINSSMRNKPLPRGLVVFGEVGLAGEIRPAPRGQERLREAAKLGF
SIAMIPKANAPKQEVEGLKVVAVERIDEALQKIRNIDE
NT seq 1377 nt   +upstreamnt  +downstreamnt
atggcaaaagccaaaaccaattacacctgtaccgaatgcggcggcatcagcaataaatgg
gcgggacagtgtccggcctgcgggcagtggaacacgctggtggaaacactggtcgagccg
gtcagcgccaatcgctattcgaatcagcatcaaggcctggcgcagacggcgccggtgttg
tcgctggtcgatatcgaagcaatcgacgtaccgcgcttcggcaccggtatcgaagaattt
gatcgcgtactcggtggcgggctggttccgggcggtgtcgtactgatcggtggtgatccg
gggatcggcaagtcaacgctcttgctccaggcgctggcgaatatttccaagcttaaacat
gtcttgtacgtcagcggcgaagaatccggctcgcagattgccttgcgcgccaaacgtctg
gcagtcgatgccaaggatctcaagctgcaggcggaaattcagctggaaaagattctgtcg
acactggcggaacacaagcctgatgtcgccgtcattgattcgattcagaccgtctattcc
gacgcactgacttcggcgcctggttcagtggcgcaagtacgtgagtgtgcagcgcagctc
acgcgttttgccaagacctccgacaccaccatcatcatggtgggccacgtcaccaaggaa
ggcgcgttggcaggtccgcgcgtgctcgagcatatcgtcgacacagtgctgtatttcgaa
ggcgacacgcattccagtttccgtctggtgcgggcattcaagaatcgtttcggtgccgtc
aatgagctgggggtgtttgccatgacggaaaagggactcaaaggagtatccaatccatcg
gcgctgtttttgtcgcagcacgacagtcaggtgccgggctcctgcgtcatggtcacccaa
gaaggcacgcgtcctctgctggtggaaattcaggcgctggtcgatagttcgcatgttccc
aacgcacgccgtttgtcggtcggcctggagcagaatcgtctggccatgctgctggcggtg
ttgcatcgccatgccggtatcgctgcgttcgatcaggatgtgttcatcaacgccgtcggc
ggtgtgaagatcaccgaaccggcagccgaccttgccgtgttgttggcgatcaattcgtcc
atgcgcaacaagccgctgccgcgcggtctggtggtgttcggagaagttgggctggcaggt
gagattcgtcccgcgccacgggggcaggagcgcctgcgcgaagccgccaagctgggtttc
tccattgccatgattccaaaggcgaacgcgcccaagcaagaggttgaaggcttgaaagtc
gttgcggtagagcgcatcgatgaagccttgcaaaagattcgcaacatcgacgaataa

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