Herbaspirillum sp. meg3: hmeg3_09805
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Entry
hmeg3_09805 CDS
T05024
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
hee
Herbaspirillum sp. meg3
Brite
KEGG Orthology (KO) [BR:
hee00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hee03400
]
hmeg3_09805
DNA repair and recombination proteins [BR:
hee03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
hmeg3_09805
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
DnaB_C
AAA_22
Lon_C
AAA_24
AAA_16
GvpD_P-loop
ChlI
SLFN-g3_helicase
RecA
AAA
AAA_14
DUF7125
nSTAND3
NTPase_1
ATPase_2
CobU
DUF7129
AAA_5
ABC_tran
AAA_28
NB-ARC
AAA_29
Motif
Other DBs
NCBI-ProteinID:
ASU38561
UniProt:
A0A223P9J0
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Position
2153465..2154841
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AA seq
458 aa
AA seq
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MAKAKTNYTCTECGGISNKWAGQCPACGQWNTLVETLVEPVSANRYSNQHQGLAQTAPVL
SLVDIEAIDVPRFGTGIEEFDRVLGGGLVPGGVVLIGGDPGIGKSTLLLQALANISKLKH
VLYVSGEESGSQIALRAKRLAVDAKDLKLQAEIQLEKILSTLAEHKPDVAVIDSIQTVYS
DALTSAPGSVAQVRECAAQLTRFAKTSDTTIIMVGHVTKEGALAGPRVLEHIVDTVLYFE
GDTHSSFRLVRAFKNRFGAVNELGVFAMTEKGLKGVSNPSALFLSQHDSQVPGSCVMVTQ
EGTRPLLVEIQALVDSSHVPNARRLSVGLEQNRLAMLLAVLHRHAGIAAFDQDVFINAVG
GVKITEPAADLAVLLAINSSMRNKPLPRGLVVFGEVGLAGEIRPAPRGQERLREAAKLGF
SIAMIPKANAPKQEVEGLKVVAVERIDEALQKIRNIDE
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagccaaaaccaattacacctgtaccgaatgcggcggcatcagcaataaatgg
gcgggacagtgtccggcctgcgggcagtggaacacgctggtggaaacactggtcgagccg
gtcagcgccaatcgctattcgaatcagcatcaaggcctggcgcagacggcgccggtgttg
tcgctggtcgatatcgaagcaatcgacgtaccgcgcttcggcaccggtatcgaagaattt
gatcgcgtactcggtggcgggctggttccgggcggtgtcgtactgatcggtggtgatccg
gggatcggcaagtcaacgctcttgctccaggcgctggcgaatatttccaagcttaaacat
gtcttgtacgtcagcggcgaagaatccggctcgcagattgccttgcgcgccaaacgtctg
gcagtcgatgccaaggatctcaagctgcaggcggaaattcagctggaaaagattctgtcg
acactggcggaacacaagcctgatgtcgccgtcattgattcgattcagaccgtctattcc
gacgcactgacttcggcgcctggttcagtggcgcaagtacgtgagtgtgcagcgcagctc
acgcgttttgccaagacctccgacaccaccatcatcatggtgggccacgtcaccaaggaa
ggcgcgttggcaggtccgcgcgtgctcgagcatatcgtcgacacagtgctgtatttcgaa
ggcgacacgcattccagtttccgtctggtgcgggcattcaagaatcgtttcggtgccgtc
aatgagctgggggtgtttgccatgacggaaaagggactcaaaggagtatccaatccatcg
gcgctgtttttgtcgcagcacgacagtcaggtgccgggctcctgcgtcatggtcacccaa
gaaggcacgcgtcctctgctggtggaaattcaggcgctggtcgatagttcgcatgttccc
aacgcacgccgtttgtcggtcggcctggagcagaatcgtctggccatgctgctggcggtg
ttgcatcgccatgccggtatcgctgcgttcgatcaggatgtgttcatcaacgccgtcggc
ggtgtgaagatcaccgaaccggcagccgaccttgccgtgttgttggcgatcaattcgtcc
atgcgcaacaagccgctgccgcgcggtctggtggtgttcggagaagttgggctggcaggt
gagattcgtcccgcgccacgggggcaggagcgcctgcgcgaagccgccaagctgggtttc
tccattgccatgattccaaaggcgaacgcgcccaagcaagaggttgaaggcttgaaagtc
gttgcggtagagcgcatcgatgaagccttgcaaaagattcgcaacatcgacgaataa
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