Herbaspirillum sp. meg3: hmeg3_10085
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Entry
hmeg3_10085 CDS
T05024
Name
(GenBank) OsmC domain/YcaO domain-containing protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
hee
Herbaspirillum sp. meg3
Brite
KEGG Orthology (KO) [BR:
hee00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hee03009
]
hmeg3_10085
Ribosome biogenesis [BR:
hee03009
]
Prokaryotic type
ribosomal protein modification factors
hmeg3_10085
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YcaO_C
YcaO
OsmC
MG_like
Motif
Other DBs
NCBI-ProteinID:
ASU38611
LinkDB
All DBs
Position
2222740..2224944
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AA seq
734 aa
AA seq
DB search
MEIKVNFLDKLRLEAKFDDFTVIADQPIRYKGDGSAPGPFDYFLASSALCAAYFVKLYCN
TRNISTENIRLSQNNIVDPENRYKQIFKIQVELPADIEESDRRGILRSIERCTVKKVVQE
GPDFIIEEVENLDADAQSLLTLKPDADASTFILGKDLPLEQTIANMSGMLADLGIKIEIA
SWRNIIPNVWSLHIRDAHSPMCFTNGKGATKESALASALGEYIERLNNNHFYAGAFWGED
IAEAEFVHYPNERWFKPGRKDALPKEILDDYCLEIYNPDGELRGSHLIDTNSGNVKRGIC
SLPYVRQSDGEVVYFPSNLIENLFVSNGMSAGNTLAEAQVQCLSEIFERAVKREILEGEI
TLPDVPQEVLAKYPGILAGIQGLEEQGFPVLVKDASLGGTYPVMCVTLMNPRTGGVFASF
GAHPSFEVALERSLTELLQGRSFEGLNDLPPPTFESNAVTEPNNFVEHFIDSSGIVSWRF
FSAKANVEFVEWDFTAQGENSNAEEAATLFGILKEMGKEAYVAVYDQLGAIACRILVPGY
SEVYPVEDLVWDNTNKALLFREDVLNLHRLDDAALEALLERLENSELDEYSDIATLIGIE
FDENTEWGQLTVLELKLLINLALQQFEDAQDQVGAFLQYNDNTVERKLFYQALSVVLEVT
LDDGLELDDYVVNFRRMFGDARMDAVIGSVDGSVRFFGLTPTSMKLEGLDRHHRLIDSYK
KLHKARANAAAAVS
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atggaaattaaagtcaactttctcgataagctgcgccttgaagccaagtttgacgacttc
acggtcatcgccgaccagcctatccgctacaagggcgatggctccgcgcccggtcccttt
gactattttctggcttcgtcggccttgtgcgcggcttacttcgtgaagttgtactgcaac
acgcgcaatatctcgaccgaaaatatccgcctttcgcaaaacaatattgtcgatccggaa
aaccgttacaagcagatcttcaagatccaggtggagttgcccgcggatatcgaagagagt
gaccgtcgcggcatcttgcgctccatcgagcgctgtaccgtgaagaaggtggtgcaggaa
ggcccggacttcatcatcgaagaagtcgagaacctcgatgccgatgcgcagtctctgctg
acgttgaagccggacgctgacgccagcaccttcattctgggcaaggatctgccgctggaa
cagaccatcgccaatatgtcgggcatgttggcggacctgggcatcaagattgaaatcgcg
tcgtggcgcaatatcattcctaacgtatggtccttgcacatccgtgatgcgcactcgccg
atgtgttttaccaacggcaagggcgcaaccaaggaaagcgcgctggcgtcggccttgggc
gagtacatcgagcgcctcaacaataaccatttctacgccggtgcgttctggggtgaagac
atcgccgaggcggaatttgtccattatccgaacgagcgctggttcaagcccggccgcaag
gatgcgttgccgaaagagatcctggatgactactgcctggaaatctacaacccggatggc
gagctgcgcggttcgcatctgatcgacaccaactccggcaacgtcaagcgaggcatctgt
tcgttgccgtacgtgcgtcagtcggatggcgaggtggtgtatttcccgtccaacctgatc
gaaaacctgttcgtcagcaatggcatgagtgccggcaacacgctggcagaagcgcaggtg
caatgtctgtccgagatttttgagcgggcggtcaagcgcgaaatcctggaaggtgaaatc
accttgcctgatgtaccgcaggaagtgctggcgaaataccccggcattctggctgggatt
caaggcctggaagagcagggatttccggtgttggtgaaggatgcatctttgggcgggact
tatccagtgatgtgcgtcacgttgatgaacccgcgcacaggtggcgtttttgcttccttt
ggcgcgcatccaagcttcgaagttgcgctggagcgcagtctcacggaattgcttcaaggg
cgcagttttgaaggcctgaacgatttgcctccgccgacctttgaaagcaatgcggtgacg
gagccaaacaactttgtcgagcacttcattgattccagcggcattgtgtcgtggcgcttt
ttcagcgccaaagcgaatgtcgagtttgtcgaatgggactttaccgctcagggtgagaat
tccaatgccgaggaagcggcgactttgttcggtattctcaaagagatgggcaaagaggcg
tacgtagcggtgtacgaccaactgggcgcaatagcctgccggattctggtgcccggttat
tcggaagtttatccggtggaggatttggtctgggataacaccaacaaagcattgttgttc
cgcgaggatgtgttgaatttgcatcgtctggacgatgctgcgctggaggcgctgcttgag
cgtctggaaaacagcgagctggatgagtattccgatattgccactctgattggcattgaa
tttgacgaaaatacggagtggggccaactgaccgtgctggagttgaagctgctgatcaat
ttggccttgcagcaattcgaggatgcgcaagatcaggtgggcgctttcttgcagtacaac
gacaatacggtcgagcgcaaattgttttatcaggccttgagtgtggtgctggaggtcacg
ctcgatgacggtctggagctggacgactatgtggtcaacttccgccggatgtttggcgat
gcacggatggacgccgtaatcggttctgtcgacggcagtgtgcgcttcttcggactgacg
ccaacgagcatgaagctggaaggtctcgacagacaccaccgcctgatcgacagctacaag
aaattgcacaaggcgcgcgccaatgccgcggctgccgttagctaa
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