Herbaspirillum sp. meg3: hmeg3_10540
Help
Entry
hmeg3_10540 CDS
T05024
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
hee
Herbaspirillum sp. meg3
Pathway
hee00061
Fatty acid biosynthesis
hee00071
Fatty acid degradation
hee01100
Metabolic pathways
hee01212
Fatty acid metabolism
hee02024
Quorum sensing
hee04146
Peroxisome
Module
hee_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
hee00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
hmeg3_10540
00071 Fatty acid degradation
hmeg3_10540
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
hmeg3_10540
09145 Cellular community - prokaryotes
02024 Quorum sensing
hmeg3_10540
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
hee01004
]
hmeg3_10540
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hee04147
]
hmeg3_10540
Enzymes [BR:
hee01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
hmeg3_10540
Lipid biosynthesis proteins [BR:
hee01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
hmeg3_10540
Exosome [BR:
hee04147
]
Exosomal proteins
Exosomal proteins of breast milk
hmeg3_10540
Exosomal proteins of breast cancer cells
hmeg3_10540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
ASU38689
UniProt:
A0A223P999
LinkDB
All DBs
Position
2318583..2320556
Genome browser
AA seq
657 aa
AA seq
DB search
MVETTQRPGAQTFPQLLLMHAQARPDRPAFREKDLGIWQTTTWAQVADEVRAFACGLAAL
GFKRGMSLAIIGNNCPRLYWAMSATQCLGGMPVPLYQDAPAADMSYVLNDAEIDFVVAED
QEQVDKVFDIKLNFSEGSERPTHIIYDDERGMRNYRQPELSSFAGVQELGRAYDKANPSF
FMEQVNALTTDDIAIILYTSGTTGKPKGVCHSHAAMIATATTLVEFDQLNDRDDVLCYLP
LAWVGDFLYSFAQTHVAGFCLNCPESPSTVMTDLREIGPTYYFAPPRIYENILTQVMIRI
EDAGWVKRKLFHGFMKIARRVGMRILDKKPDVSLSDRLLYAIGHLVIYGPLKNVLGMSRI
RVAYTGGEAIGPDLFDFYRSLGINLKQLYGMTETCVTVCMQPSGDVKLDTVGRPMKGVEV
HIDSNGEVLVRSPGLMKSYFKRPDATAEAIDENGYFHTGDAGFFDADGHLKIIDRAKDVG
KMACGTMFAPKYIENKLKFFPFIKEAVVFGNQREQCTAFINIDMDAVGNWAERRHLAYSG
YTDLAAHQSVYALIAECVEKVNADLVQDPLLADSQVHRFLILHKELDPDDDELTRTRKVR
RGFIAEKYGVLIEALYAGKQSQYIETQVKFEDGRQGMISADLKIADVKTFANLNQAA
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atggtggagacaacacaacgtccaggagcgcagacatttccgcagttgctcctgatgcat
gcacaagcacgcccggatcgcccggcattccgggaaaaggatctgggaatctggcaaacc
acaacgtgggcgcaggttgccgacgaggtgagggcgtttgcctgcggcctggctgcactc
ggtttcaagcgcggcatgagcctcgcgatcatcggcaataattgccctcgcttgtactgg
gctatgtcggccacgcaatgcctgggcggcatgccggtaccgctgtatcaagacgctccc
gcagccgacatgtcctatgtgctcaatgatgcggaaatcgatttcgtcgttgccgaagac
caggagcaggtcgacaaggtcttcgacatcaaactgaatttctccgaaggcagcgaacgt
ccgacgcatatcatctatgacgatgagcgcggcatgcgcaattatcgccagccggaactg
tcgtcgtttgccggcgtgcaggaactgggacgtgcctacgacaaggccaatccatcgttc
ttcatggagcaggtcaatgcgctgacgactgacgatatcgccatcattctgtacacctcc
ggcaccacgggtaagccaaaaggcgtatgccactcgcacgccgcgatgatcgccaccgcg
acgacgctggtggagttcgatcagctcaacgatcgcgacgacgtgctgtgttatctgccg
ctggcatgggtgggcgactttttatactcgttcgcgcagacgcatgtggccggcttctgc
ctcaattgcccggagtcgccgagcaccgtcatgacggacttgcgggagatcggcccgacc
tattatttcgcgccgccgcgcatctacgaaaacatcctcacgcaagtgatgatccgcatc
gaagatgccggctgggtcaagcgcaagctgtttcatggcttcatgaagattgcgcgccgc
gtcggcatgcgcattctcgacaagaagccggatgtctcgctgagcgaccgactgctatac
gcgatcggtcatctggtgatctacggcccgctgaaaaatgtactcggcatgtcgcgcatc
cgtgtggcgtataccggcggtgaagcgatcggcccggacttgtttgacttctaccgttcg
cttggcatcaatctcaagcagttgtacggcatgacggaaacttgtgtgacggtgtgcatg
caaccttccggtgacgtcaagctcgacactgtcggccggccgatgaagggtgtggaggta
catatcgacagcaacggcgaagtgctggtgcgctcgccgggattgatgaaatcttacttc
aaacgtcctgatgcaactgcggaagcgattgatgaaaacggttattttcataccggtgac
gccggcttcttcgacgccgatggccatctgaaaatcatcgaccgcgccaaggatgtcggc
aagatggcctgcggcacgatgttcgcacccaagtacatcgagaacaagctcaagttcttt
cctttcatcaaggaagcggtcgtcttcggtaaccagcgcgagcaatgcactgccttcatc
aacatcgatatggacgccgtcggtaattgggccgagcgacgccatcttgcctacagcgga
tacaccgatttggctgcgcatcaaagtgtctatgccttgattgccgaatgcgtcgaaaag
gtcaacgctgatctggtgcaggatcctttgctggccgattcgcaggttcatcgctttttg
attttgcataaagaactggatccggacgatgacgaactcacgcgtacccgcaaagtgcgg
cgcggcttcatcgccgagaaatacggcgtgctgatcgaagcgctctacgcgggcaagcaa
tcgcaatacatcgagacgcaggtgaagttcgaagacggtcgccagggcatgatttcggcc
gatctgaagatcgccgacgtcaagaccttcgccaacctcaatcaagcggcatag
DBGET
integrated database retrieval system
