Herbaspirillum sp. meg3: hmeg3_11105
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Entry
hmeg3_11105 CDS
T05024
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
hee
Herbaspirillum sp. meg3
Pathway
hee02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hee00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
hmeg3_11105
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hee02000
]
hmeg3_11105
Transporters [BR:
hee02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
hmeg3_11105
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
RE_XamI
Motif
Other DBs
NCBI-ProteinID:
ASU38780
UniProt:
A0A223P9S3
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All DBs
Position
2446575..2448152
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AA seq
525 aa
AA seq
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MKKTVLSSLLAVALLGTAAVNSAGAQTLNIAFADPLSSLDPQLNNHAGDRSVDLHFWDLL
VENNYNKLQPGLAVSWKNIDPKTWEFKLRPNVKWQDGKPFTADDVIFSYQRARAVPGSVA
TFAGYLRTVESVTAKDPLTLIIKTNIANPDLPLNLASVHIVSKHVGEKSQTENYNSGAAM
VGSGPYKYVSYTPGDRVIMERNNDYWGQKQLWEKVNYRYINNAAARTAALLSGDVDVIDK
VSVSDLAKLKQSPNVKVFPYNGLRVLLLQPSFHEGPSPYITDNNGKQLDKNPLLDARVRK
ALSLAINRKALVDRILQGAATEANQWMPADTFGYNPDIKNIPNDVNQAKKLLADAGFPQG
FKLTIHVPNDRYPQAPETMQAVAQFWTRIGVKTQVEVLPWASYSARANKNEFAVSVLAWG
NGTGEASYALVNVLATVDAKKGLGASNWNHYSNPAIDKALADSTAEFDAAKREAILRNAA
KIVSDDAGVIPLYHYQNIWAAKRGLKVTPASSDRTTAMMVTQDKK
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaaccgtactttccagcctgctggccgtcgcgcttctgggaaccgcagccgtc
aattcagccggcgcgcaaacgctgaacatcgcattcgccgatccgctgtcctcgctcgat
ccgcaactgaacaaccatgccggtgatcgttccgtcgacctgcacttttgggatctgctg
gtcgagaacaattacaacaagctgcaacctggcctggcagtcagctggaaaaatatcgat
ccgaagacctgggaattcaagctgcgtcccaacgtcaagtggcaggacggcaagccgttc
accgcggacgacgtaatcttctcgtatcaacgcgcacgcgccgtgccgggcagtgtggcg
actttcgccggctatctgcgcactgtggaatcggtgaccgccaaagatccgctgaccttg
atcatcaagaccaatattgccaatccagacctgccgctgaacctggcgtcggtacatatc
gtcagcaagcacgttggtgagaagtcacaaaccgagaactacaacagcggcgccgccatg
gttggcagcggcccatacaagtatgtttcctacacgccgggcgaccgcgtcatcatggag
cgcaacaatgactactggggccagaagcaactctgggaaaaggtcaattaccgttacatc
aacaacgccgctgcacgtaccgctgcgctgctgtcgggtgacgtcgatgtaatcgacaaa
gtatcggtgtcggatctggccaagttgaagcagtcgccgaacgtcaaggtgttcccatac
aacggcctgcgcgtgttgctgttgcaaccaagtttccatgaaggtccgagcccgtacatt
accgacaacaacggcaagcaactcgacaagaatccattgctggatgcccgcgtgcgcaag
gccttgtcgctggcgatcaaccgcaaggcgctggtcgaccgtattttgcaaggcgcagcg
accgaagccaatcaatggatgccggcggataccttcggctacaaccctgatatcaagaac
atcccgaacgatgtgaaccaggccaagaagctgctggctgatgccggcttcccgcaaggc
ttcaagctgaccatccacgtgccgaacgaccgctatccgcaagcaccggaaaccatgcaa
gccgtggcgcaattctggactcgcatcggtgtgaagacgcaagtggaagtgttgccatgg
gcgtcctattcggcacgggccaacaagaatgagtttgccgtcagcgtgctggcatggggc
aacggtaccggtgaagccagctatgcactggtgaacgtgctggcgactgtcgacgccaag
aaggggctgggcgcttccaactggaatcactacagcaatcctgccatcgacaaggcgttg
gccgattcgactgccgaattcgacgcggccaagcgtgaagcgatcctgcgcaatgcagcc
aagatcgtctccgacgacgccggtgtcattcctctgtatcactatcaaaacatctgggcg
gcaaagaggggcctgaaggtcacaccggccagcagcgatcgcaccaccgcgatgatggtg
acacaggataagaagtaa
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