Herbaspirillum sp. meg3: hmeg3_11285
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Entry
hmeg3_11285 CDS
T05024
Name
(GenBank) circadian clock protein KaiC
KO
K08482
circadian clock protein KaiC
Organism
hee
Herbaspirillum sp. meg3
Brite
KEGG Orthology (KO) [BR:
hee00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
hmeg3_11285
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Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
GvpD_P-loop
AAA_16
DnaB_C
AAA_22
RecA
nSTAND3
AAA_19
PAXNEB
IstB_IS21
NPHP3_N
AAA_7
AAA_24
MEDS
AAA
AAA_29
SLFN-g3_helicase
CbiA
DEAD
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
ASU38814
UniProt:
A0A223P9Z3
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Position
complement(2486564..2488081)
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AA seq
505 aa
AA seq
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MDLHKNNLTSGRLPAYSDRAATGIAGLDTVLAGGLTAHRLYLVEGTPGTGKTTFGLQFLL
SGAAKGETGLYITLSETASELKAVAASHGWSLEGLSLFDLINEEDLNPDYQQSILHPSEI
ELGETVRSVMERVDELRPSRVIFDSLSEMRLLAQNPLRYRRQILALKHFFATRNCTVLML
DDRTSDPGDLQLHSIAHGVISLEQIAQEFGSERRRLRVVKMRGIKFSGGYHDFLLETGGM
RVFPRLVASEHAIEFDDAVVSTGVPELDALLGGGLVRGTNTLLSGPSGVGKTTTTIRCIL
SALQRGERAAYYLFDEGIGTLLIRSRALGMDISSYIADGSLTLYQINPAEMSPGEFASKI
RQAVEQEDRNFIAIDSLNAYLQAMPGEQFLLLQMHEVLTYLNLQGVTALLVLGQHGLVGE
IRSDVDLSYLSDAILMYRFFEAHGDISTAVSVIKSRTNHHARTIHEFRLSAHHGLQIGKP
LLDFEGIMSGLPSYRGKTPMLNNAG
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atggatctacacaaaaataacctcacttcaggtcgccttccagcgtactccgaccgcgct
gcaactggtattgcaggcctcgataccgtgctcgccggcggcttgactgcgcatcgtctt
tatctggtcgaaggcactcccggcaccggcaaaaccactttcggcctgcaatttctcctc
tcgggcgcggcaaagggcgagaccggtctctacattaccctgtccgaaaccgcgtccgag
ctgaaagccgtcgccgcctcgcacggctggtcgctggaagggctgtctctcttcgatctg
atcaatgaagaagacctcaaccccgattatcagcaatccatcctgcacccgtctgaaatc
gaacttggcgaaactgtcaggagcgtcatggaacgagtggatgagctgcgaccgtcgcgc
gttatcttcgatagcttgtcggagatgcgtcttctggcgcagaacccgttgcgctaccgg
cgccagattctggcgctcaaacatttttttgcgacgcgtaactgtaccgtgttgatgctt
gacgatcgcacgagcgatcccggggatctgcaactgcatagcattgcccacggcgtgatc
agtcttgagcagatcgcccaggagttcggctccgagcggcgtcgcctgcgcgtggtgaaa
atgcgcggtatcaaattcagcggcggctatcacgatttcttgctcgaaaccggcggtatg
cgtgtgtttccaagattggtggcatcagaacatgccatcgaatttgacgatgcagttgtc
agtacgggtgttcccgaacttgacgccctgctcggcggcggtctcgtgcgcggcaccaat
accttgctgagcggcccctccggcgtcggcaagacaaccaccacgattcgctgcatattg
agcgctctgcagcgcggtgaacgtgcggcttactatctgttcgacgaaggcatcggcacc
ttactgatccgttcgcgcgcgctggggatggacatctcgtcctatatcgccgacggcagc
ctgacgctgtatcagatcaatccggcggaaatgtcgccgggagaatttgccagcaaaatc
cgtcaggccgtcgaacaggaggatcgcaactttatcgccatcgatagcttgaatgcctat
ctgcaagccatgcccggagaacaattcctgttgctgcagatgcatgaggtactgacttac
ctgaacctgcaaggggtgacggcattgctggtattgggtcaacacggcttggtcggggag
attcgttcggacgttgatctgagttatctgagcgatgccatcctgatgtaccgcttcttc
gaggcgcatggcgatatatcaaccgccgtctcggtgatcaagagccgcaccaatcaccat
gcaagaacgattcacgagttccgtctcagcgcccatcatggtctgcagatcgggaaaccg
ctgctggactttgagggcatcatgagcggcttgccatcctatcggggcaaaacgcctatg
ctgaacaatgccggttga
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