Herbaspirillum sp. meg3: hmeg3_11760
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Entry
hmeg3_11760 CDS
T05024
Name
(GenBank) hypothetical protein
KO
K20276
large repetitive protein
Organism
hee
Herbaspirillum sp. meg3
Pathway
hee02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hee00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
hmeg3_11760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_13
DUF4347
Big_3_3
Motif
Other DBs
NCBI-ProteinID:
ASU38893
UniProt:
A0A223P9U1
LinkDB
All DBs
Position
complement(2644499..2649712)
Genome browser
AA seq
1737 aa
AA seq
DB search
MNSTTPHHFLEALDLDAAKPVRTRLQRTPHRLALEQRFMFDGAAVVDAAHAAADTAALAK
IAEVPAAVEVRAADPSKNDQKKEVVIVDTSVADYKTLEASIRAGVGIIEIDGSKDGLAQI
AKWAETQGGYDSISILSHGADGQLHLGTTTLTDSSLSDTQVQAELAELGHALKAGGDLLL
YGCDIAETTNGQTFINDLSQATGADIAASSDATGSAARGGDWTLEYRTGTIEASTLTASA
YQGLLTSSTFDFETVAQGTDSNTISQTIGSDTIVITSTDANMLVDTELNAFGSDISNASG
KVLASGEGGVFTESRLSLTVAGSKTFDLTSFTLAQLGPDGLSITLTTNKGSETFTASFVG
NSWVLNLSTATHPSYFTGVTNVVITTADAGGVFEWGFDNIVLSNITDPNAPPSTTVATAA
LQHDTGVNGTDFITNVASQTISGTLSASLVTGEFVEVSFDGGISWSSATSSVGSASWSVS
TTLSGSNTFEARVTNVNGSSTPFTHTYTFDNVAPTTTVGSLSFSNDTGSSSTDFLTSNPS
QTINATLSTTLAAGDVVWGSIDNGATWTDITSKVSGTALTWNGVTLISSNTLKLKVQDAA
GNDGTIAQQIYTLDTTAPTISFSSIVFSNDTGTSSSDFITNNPSQTITATLSATPAGTDV
VWGSLNNGATWINITSKVSGTTLTWNGVTLTGSNTLLLRVTDAAGNNGTSTSQAYVLDTT
APTIAFSTIGFSNDTGSSNTDLITSNPSQTITATLSGTPAGSDVVWGSLDNGTTWTNITS
KVSGTTLTWNGVTLTGSNTLLLRVSDAAGNNGASSSASYTLDSTAPATPGTPTLDASSDT
GASSSDKITNDNTPTLSGTAENGSTVTIYDGATLLGTVVAGSSGWSYTTGVLSDGSHVFT
VTAKDTAGNVSAASAGLTVTVDTAAPAVNSVTTPANGTYYSGQALDFVVNFGEAVIVDTG
SGTPSIAIVVGATTRYATYLSGSGTSALTFRYVVPSGDSDNNGITVGALSANGGTLKDTA
GNNATLTINPGSTAAILVDGSQPSITGVSASTADGAYGSSQIVTIVVNFSGAVTVDTTGG
IPALTLNSGGTATYTGGSGSSALTFSYTVANGQNSADLDYNSTAALSLNGATIIETGGSH
QNVSITLATPGTAGSLGANKDIVIDTTAPTTTFSALSFSGDTGTSNTDFITNTAAQTIRA
TLSVAPTGSETVYGSLDNGATWTDITSKVSGTSLTWNGVTLTGSNTLQLKVQDAAGNQST
PKTQAYTLDTTAPTITFSNLSLSADNGSSSTDFITNTAAQTITATLSAAPAGTDIVYGSL
DNGATWTDITSKVSGTTLTWNGVTLSGSNTLLLRVTDNAGNDGLVKNQNYTVDTTPPTIT
FSNVALSADTGASNTDFITATAAQTITATLSGAPTGTDRVFGSLDNGVTWTNITAKVTGT
TLNWDGVTLLGGNHTLLLKVQNNAGNDGVSANQAYTLEVATITTTTTVTPLIPTNPPVAS
LDPVIPPPQPTVSVVFTSPAAASLTFLSGESPLSTTQQGWGAPGQNSAALDFNNGERVSL
LTAPATQGSYQVVVLERTGSGDSLQVNAPLNDVTFAAGQRISFQVPADAFGHTNPDAVVT
LSATTADGRPLPAWLKFSAQSGTFSGQVPTGMRGEVSIRVVARDNQGHEAVQVLKIRLGE
RAQSARNHLLPGDWQDAEKLAVGRSSLSEQLHASRTGGTDRLAALARSVKVAMTGHA
NT seq
5214 nt
NT seq
+upstream
nt +downstream
nt
atgaacagtacaactccccatcatttcctcgaagcgctcgatcttgacgcggccaaaccg
gtccggacacgcttgcagcgtacaccgcaccggctcgcgctggagcagcgtttcatgttc
gacggtgccgcagtggtcgatgctgcccatgccgcagccgataccgccgcgctggccaag
attgccgaggtgccggcggcggtcgaagtgcgcgccgccgatcccagcaagaacgatcaa
aagaaggaagtggtcatcgttgacacttcggtggccgactacaagacgctggaagccagt
attcgcgccggtgtaggcatcatcgaaatcgacggcagcaaggatggcctggcgcagatc
gccaaatgggcagagacacaaggcggctacgactcgatcagcatcctgtcgcatggagcc
gatggccagttgcacctgggtaccaccacgctcaccgacagcagcctgtccgacacccag
gtgcaggccgagctggctgagttgggacacgctctcaaagcgggcggcgatttgctgctg
tacggttgcgatattgccgaaacaacgaatggccagaccttcatcaacgacctgtcgcaa
gcgaccggggccgacatcgcagcctccagcgacgccaccggcagcgcggcgcgcggcggc
gactggactctggagtatcgcaccggcacgatcgaagccagcacgctgacagccagcgct
tatcagggacttctgaccagctcgactttcgatttcgaaactgtggcgcaaggcacggac
agcaacaccatctcgcagacaatcggttcggacaccatagtcatcacatcgaccgatgcc
aacatgctggtcgatactgaactcaatgcctttggctcggacatcagcaatgcctccggc
aaagtgctggcctcaggggaaggtggcgtctttaccgagtcacggctctcgctgaccgtt
gccggcagcaaaacctttgacctgacttcgttcacactggcccagcttggccccgatggc
ctgagcattaccctcaccacaaacaagggcagtgaaaccttcacggccagctttgtcggc
aactcctgggtgctcaatctgtccaccgccacgcatccgagttattttaccggcgtcacc
aatgtcgtgattaccaccgctgatgccggcggcgtcttcgaatggggcttcgacaatatc
gtcctgagcaatatcaccgatcccaacgccccgccgtccaccaccgtcgcaaccgccgcc
ctgcaacacgacactggtgtcaacggcaccgacttcatcaccaacgttgccagccagacg
attagcggcaccctgtcggccagcctggtcaccggcgaattcgtcgaggtctcgttcgat
ggcggcattagctggtcctccgccaccagtagcgtcggcagtgccagctggtcggtcagt
accacgctgtccggcagcaataccttcgaggctcgcgtcaccaacgtcaatggcagcagc
acgccgttcacacacacttacaccttcgacaacgtagcgccgaccaccaccgtgggcagt
ctgtcgttctccaacgacactggctccagctccaccgatttccttaccagcaacccatcc
cagaccatcaacgccaccctcagcacgacacttgctgctggcgatgtcgtctggggctca
atcgacaacggcgctacctggaccgacatcaccagcaaggtgagcggtaccgcgctgacc
tggaacggcgtgacgctgatcagcagcaatacgctcaagctaaaagtacaagacgccgcc
ggcaacgacggtaccattgcgcagcagatctatacactggacaccaccgcgccgaccatc
agcttcagcagtatcgttttttcgaacgacacgggcaccagcagctccgacttcattacc
aataacccgtcccagaccatcaccgccacgctcagcgcgacacctgcgggtactgatgtg
gtctggggctcactcaacaacggcgcgacctggatcaacatcaccagcaaggtgagcggc
accacgttgacctggaacggcgtgacactgaccggcagcaatacgctcctgctgcgcgtg
acagatgccgccggcaacaatggcactagtacgtcccaggcttatgtgctcgacaccacg
gcaccgacgatcgcattctccacaatcgggttctcaaacgacaccggcagcagcaacacc
gatctcatcaccagcaacccgtcccagaccatcaccgccacgctcagtggcacaccggcc
ggttccgacgtggtctggggctcgctcgacaacggcactacctggaccaacatcaccagc
aaggtgtccggcaccacgttgacctggaacggcgtgacactgaccggcagcaatacgctc
ctgctgcgcgtgtcagatgccgcagggaacaatggcgccagttcgagtgcaagttacacg
ctcgatagcactgcccccgccacacccggtaccccgacccttgatgcaagcagcgatacc
ggcgcatccagcagcgacaagatcaccaacgacaacacaccgactcttagcggcacggca
gaaaacggcagtaccgtcaccatctacgacggtgccacgctgctcggcaccgtggtggcc
ggcagtagcggctggagctacaccaccggcgtgctgtccgacggcagtcacgtcttcacc
gtcactgccaaagacaccgccggcaacgtctcggccgcttctgccggactgaccgtcacg
gttgataccgccgcgcctgcagtcaactcggtcaccacgccagccaatggcacctactac
agcggccaggcactggacttcgtcgtcaacttcggcgaagcggtcatcgtcgataccggc
agtggcacgccaagcattgccatcgtggtcggtgccactacgcgctacgccacctacctc
tctggctcaggtaccagtgcgctgacgttccgttacgtcgtgcccagtggcgacagcgac
aacaacggcatcacggtcggcgcactttcagccaatggcggcacgctcaaggataccgcc
ggcaacaacgcgacactcacgatcaatcccggatctaccgcggcgatcctggtcgatggc
tcccaacccagcatcaccggcgtaagtgcgagcacggcagacggcgcctatggcagcagc
cagatcgtgaccattgtggtcaacttcagcggcgcagtcacggttgataccaccggcggt
ataccggcgctgacgctcaactccggtggcactgccacctataccggcggatcaggcagc
tcggcattgactttcagctatacggttgccaacggccagaactcagccgatctcgattac
aactcgaccgccgcactgtcactcaacggtgccaccatcatcgaaaccggcggcagtcac
cagaatgtctcgatcaccctggcgacaccggggaccgcgggttccctcggtgccaacaag
gatatcgtcatcgacaccacggcaccgacgacgaccttcagcgcgctctccttctcgggc
gacaccggcaccagcaacaccgacttcatcaccaacaccgcggcgcaaaccatcagagcc
acactgagcgtggccccaaccggttccgagaccgtctatggctcgctcgacaatggtgct
acctggactgatatcaccagcaaggtcagcggcacctcgctgacctggaacggtgtcacc
ctgaccggcagcaatacgctgcagcttaaagtgcaagacgccgccggcaatcaaagcacg
cccaagacccaagcctatacgcttgataccacagcaccgacaatcaccttcagcaatcta
tccctgtcggcagacaatggcagcagcagtaccgacttcatcaccaataccgcggcgcaa
accatcactgcgacactgagcgccgctccggccggtaccgacatcgtctacggctcgctc
gacaacggtgccacctggaccgatatcaccagcaaggtcagcggcaccaccctgacctgg
aacggcgtcacgttgagcggcagcaacacactgctgctcagggtgacggacaacgccggc
aatgatggcttggtcaagaaccagaactacacggtggacaccaccccgccgaccatcaca
ttcagcaacgtggcgctatcggccgatactggtgccagcaatactgatttcatcaccgcc
accgcagcacaaaccatcaccgcgacgctcagcggcgcgccgacaggcaccgacagggtt
ttcggttcgctcgacaatggtgtcacttggaccaatatcacagccaaggtcaccggtacc
acgctgaactgggacggcgtcacactgcttggcggcaaccatacgctgctgctcaaggtg
caaaacaatgctggcaacgacggcgtcagtgccaaccaggcctataccttggaagtcgcc
accatcaccaccaccaccacggtgacgccgttgattccgaccaacccgcctgtggcctcc
ctcgacccggtgattccaccacctcagccgacggtatcggttgtgtttacgtcacccgcg
gccgcctcgctgaccttcctgtcgggcgaatcgccgctcagcacgacgcaacaaggatgg
ggcgcaccaggccaaaatagcgctgcactcgacttcaacaatggcgaacgcgtcagtttg
ctgaccgcaccggcgacccagggaagctatcaagttgtggtgctggagcgcaccggcagc
ggtgactccctgcaggtcaatgccccgttgaacgatgtgacattcgctgcaggccagcgc
atctcctttcaggtgcctgccgatgccttcggccacaccaatccagatgccgtggtgacc
ttgtcggcaaccacggcggatggtcgtcccctgccagcgtggttgaaattctcggcacag
agcggcaccttctccggccaggttccgacaggcatgcgcggcgaagtcagcatccgggtg
gtggcacgtgacaatcaggggcacgaagcagtacaagtgctcaagatacgtctcggcgag
cgcgcacaaagtgcccggaaccacctgcttcctggcgactggcaagacgcagaaaaactc
gccgtcggccgcagcagcctgagcgagcaactgcacgcgtcgcgtaccggcggtaccgat
cggctggctgcgctggcacgtagcgtcaaggtcgcgatgacagggcatgcatga
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