Herbaspirillum sp. meg3: hmeg3_12015
Help
Entry
hmeg3_12015 CDS
T05024
Name
(GenBank) spermidine/putrescine ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
hee
Herbaspirillum sp. meg3
Pathway
hee02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hee00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
hmeg3_12015
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hee02000
]
hmeg3_12015
Transporters [BR:
hee02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
hmeg3_12015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
10_blade
Motif
Other DBs
NCBI-ProteinID:
ASU38937
UniProt:
A0A223PA12
LinkDB
All DBs
Position
2700373..2701419
Genome browser
AA seq
348 aa
AA seq
DB search
MKRPTLALLSPLALGLLFSAGLSQAAELTVVNFGGANANAQKVAYVEPFQKSTGTKVVTA
EFNGELAKVKAMVEAKKVTWDVVEIDGGDLARACEDGLIEKLDLIKTIKKDDYIPESLNS
ECGMGAFVWSTVLAYNGDKLKTAPQGWADFWDTKKFPGKRAMKKGAQYTLEFALMADGVP
TKDVYKVLSAKGGVDRAFKKLDQLKPNIQWWEAGALPAQFLVSGDVVMSTAFNGRIDAAQ
REGKNLKVVWAGSVYTLDYWVIPKGSPNKALGEKFIIFATNAENQKVYANNIAYGPVNKN
TLKLLDAKTLANLPTSTANAKDAIQLSQQFWTDHGEELEQRFAAWVAK
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgccctactctcgctctgctctctccgctcgctttaggtttgttgttttcggcc
ggtctcagccaggcggctgaactgaccgtggtcaattttggcggcgccaatgccaatgcg
cagaaggtcgcctatgtggaaccgtttcaaaaaagcaccggcaccaaggtggtcaccgcc
gaatttaacggtgaactggccaaggtcaaggccatggtcgaagccaagaaagttacctgg
gatgtggtggaaatcgacggcggtgatctggcgcgcgcctgtgaagacggcctgatcgaa
aaactcgatctgatcaagacaatcaagaaagacgattacattcctgagtcgcttaatagc
gaatgcggcatgggcgccttcgtctggtcgaccgtcctggcgtacaacggcgacaagctc
aagactgcacctcaaggctgggcggatttctgggataccaagaaattccctggcaaacgc
gccatgaagaaaggcgcccagtacacgctggagttcgctctgatggctgacggcgtaccg
accaaggatgtctacaaggtactgagcgccaagggcggcgtggatcgcgcgttcaagaag
ctcgatcagcttaagccgaacattcaatggtgggaggcaggtgcgttgccggcacagttc
ctggtgtctggggacgtcgtgatgtcgaccgctttcaacggccgtatcgacgccgcacag
cgtgaaggcaagaacctcaaggtagtctgggccggcagcgtttatacactggattactgg
gtgattcctaagggttcgccgaacaaggcgctgggcgagaagttcatcatcttcgcaacc
aacgcggagaaccaaaaggtctatgccaacaatattgcttacggcccggtcaacaagaac
acgctgaagctgctggacgcgaagacgctggcgaatttgccgacgtcgaccgccaatgcg
aaggatgcaatccagttgagccagcaattctggaccgaccacggtgaagaactggaacaa
cgctttgctgcatgggttgccaaataa
DBGET
integrated database retrieval system
