Herbaspirillum sp. meg3: hmeg3_12315
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Entry
hmeg3_12315 CDS
T05024
Name
(GenBank) LysR family transcriptional regulator
KO
K21703
LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
Organism
hee
Herbaspirillum sp. meg3
Brite
KEGG Orthology (KO) [BR:
hee00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hee03000
]
hmeg3_12315
Transcription factors [BR:
hee03000
]
Prokaryotic type
Helix-turn-helix
LysR family
hmeg3_12315
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like
MarR_2
PBP_like_2
HTH_28
Motif
Other DBs
NCBI-ProteinID:
ASU38990
UniProt:
A0A223PAC2
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All DBs
Position
complement(2768720..2769592)
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AA seq
290 aa
AA seq
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MTPSQLRAFLAVARNRGFSAAARTLGVSQPTLTSQVQALERQHNVELFYRRGRRLDLTDT
GQRLLPIAQKIAELELDAYNLLYNSGVLNVGHLKIGAVGPFHVIEMVDAYRRKFPNVELS
IRMGNSAETMADLENYVTDVAVLASFNDDPRFVAVPYADHAIVVFAHVDHPLAKHDSIRL
QDLHGQPMVMREQGSTTRLALEKVLKEADVMPRVVMEIGSREALREAVARGIGLGTVSEA
EFVPDPRFKLLPIEGNPVSTHTYIYCLADRKDSRLVASFLEQVSAMPAAE
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgacaccttcgcaacttcgcgctttccttgccgtggcccgcaaccgcggcttcagcgcc
gctgcccgcacgctgggcgtgagccagccgacgctgacctcgcaggtgcaggcgctggag
cggcagcacaatgtcgagctgttctaccgccgcggccgccgtctggatctgaccgatacc
ggccagcgcctgttgccgatcgcacaaaagatcgccgagctggagctggacgcctacaac
ctgctgtacaactccggcgtgctcaatgtcggacacctgaagatcggcgcggtcgggcct
ttccacgtgatcgagatggtggatgcttatcgccgcaagtttcccaatgtggagttgtcg
atccgcatgggcaattcggcggagacgatggccgatctggaaaattacgtcaccgacgtt
gccgtgctggccagcttcaacgacgatccgcgctttgtcgcggtgccgtatgccgatcac
gccatcgtggtgttcgcccacgtcgaccatccgcttgccaaacacgattcgatcagattg
caggatctgcacggccagcccatggtgatgcgcgagcagggctcgaccacgcggctggcg
ctggagaaggtgttgaaggaagcggatgtcatgccgcgcgtggtgatggaaatcggcagc
cgcgaagctttacgcgaagccgtggcgcgcggaatcggtttggggacggtgtcggaggcg
gagtttgtgcccgatccgcgtttcaaactgctgccgatcgagggcaatccggtcagcacg
catacctatatctattgtctggcagatcggaaagacagccgcctggtcgcatctttcctg
gagcaggtttctgctatgccagcggctgaatga
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