Herbaspirillum sp. meg3: hmeg3_12705
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Entry
hmeg3_12705 CDS
T05024
Name
(GenBank) C4-dicarboxylate ABC transporter
KO
K11688
TRAP-type transport system periplasmic protein
Organism
hee
Herbaspirillum sp. meg3
Pathway
hee02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
hee00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
hmeg3_12705
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hee02000
]
hmeg3_12705
Transporters [BR:
hee02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
hmeg3_12705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctP
POPDC1-3
Motif
Other DBs
NCBI-ProteinID:
ASU39061
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All DBs
Position
complement(2848839..2849861)
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AA seq
340 aa
AA seq
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MTSQTRRSIIGALATAPLWTAGTSVWAQTTSLKISHQFPGGTINEGDFRDRLTRLFAEEV
SKRTKGSLKFEIYPGSSLMKVNAQFSAMRKGALDLSLVPLNYAGGEVPETNIGLMPGLVT
SYAQGSAWKNAEVGKELARILAEKGILIVSWIWQAGGVASRGKPIVDPADAKGMKVRGGS
REMDLILKEAGAAVVTLPSNEIYAAMQTGAMDAAMTSSTSFMSFRLEEVAKALTTGRDKA
YWYMFEPLMISKSVFEKLSKDQQAAIMAVGAEMEQFALKAAQTDDVAVAAVYQKAGAKVV
DLDAATVKKWQDIARATAWKDFAARNANCANLLKLAEKLL
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgacttcgcaaacccgtagaagcattatcggagcgctggcaacagcaccattgtggaca
gccggtacctcggtatgggcacagaccacctcgctgaagatttcccatcaattccctggc
ggcacgatcaacgaaggcgattttcgcgatcgtctgacccgcctgtttgctgaagaagtt
agcaaacgcaccaaaggcagcctcaagttcgagatctatcccggctcctcgctgatgaag
gtcaatgcgcagttctcggccatgcgcaaaggcgcgcttgacctgtcgctggtgccgctc
aattacgccggcggtgaagttccggaaaccaatatcggcctgatgccgggactggtgacc
tcgtacgcacaaggctcggcatggaaaaacgctgaagtcggcaaagaacttgcacgcatc
ctggccgagaagggcatcctgatcgtcagctggatctggcaagcgggcggtgtcgcctcg
cgcggcaagccgatcgttgatcctgccgacgccaagggcatgaaagtgcgcggtggttcg
cgcgaaatggatctgatcctgaaagaagcgggcgctgccgtcgtgacgctgccgtccaac
gaaatctacgcggccatgcaaaccggcgcgatggatgcggcgatgacatcatcgacgtct
ttcatgtctttccgcctggaagaagtcgccaaggcgctgaccaccggtcgcgacaaggcg
tactggtacatgttcgagccgctgatgatttccaagtccgtgttcgaaaaactgagcaag
gatcagcaagccgccatcatggccgtcggcgccgagatggagcagttcgcactgaaggct
gcccagaccgatgacgtcgcggtcgccgccgtgtaccagaaagccggcgccaaggtcgtc
gacctcgatgccgcaaccgtcaagaagtggcaggacatcgcccgtgcgactgcatggaag
gacttcgccgcgcgtaacgccaattgtgccaatctgttgaaactggcggagaagctccta
tga
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