Herbaspirillum sp. meg3: hmeg3_12870
Help
Entry
hmeg3_12870 CDS
T05024
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
hee
Herbaspirillum sp. meg3
Pathway
hee02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hee00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
hmeg3_12870
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hee02000
]
hmeg3_12870
Transporters [BR:
hee02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
hmeg3_12870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
pYEATS
Motif
Other DBs
NCBI-ProteinID:
ASU39089
UniProt:
A0A223PAE8
LinkDB
All DBs
Position
2881917..2883506
Genome browser
AA seq
529 aa
AA seq
DB search
MALSFKKKLLSLAFSGIAATVALPLTAHSAAAAELKIGLFADVSTLDPHFNNIAPNISLS
SHLFDALVNVDATGKLIPGLAVSWKAIDPTTWEFKLRRGVKFHDGSDFTAEDVVFSLDRP
ATLTNSPGPFTSYTKQIVAKEIVDPYTVRLKTATPYGPLALDVSTIFIVSKKAAQNATTE
DFNSGKALIGTGPFKFGSFKRGDSIELVRNDSYWGGKADWDKVTFRILTSDGARLAALLA
GEVDAIDSVPPADVPKLKTNPKFELVQRTSWRTIFWTLDQSRDKTPDITDKSGKPLDKNP
LKDIRVRQAISKAINRQALTERTLEGLGTPASNIVAPGILGYADNLKVEKYDPEGAKKLL
AAAGYPNGFALTLHGPNNRYINDERVVQTVAQFLSRVGIQTKVETFPLSVYFGKARNGDF
SVSLLGWGTLAGDFGLRTLVGTTDASTGWGSWNWGKYSNPQVDKLVQSSLASVDEKQRQE
FAKQAATVALTDYAVIPLHHQYATWAVRKGIKYTPRIDEFTFAHQFHPQ
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atggcattgtctttcaagaaaaaattgctcagcctggccttcagcggtatcgccgccacc
gtcgcgctacctctgactgcgcattccgcggcagccgccgaactcaagatcggtctgttc
gccgacgtgtccacactggatccccatttcaataacatcgccccgaacatctcgttgtcg
tcgcacctgtttgacgcgctggtcaatgtcgatgccaccggcaaactgatccccggtctc
gccgtatcgtggaaagccattgatccgaccacctgggaattcaaactgcgccgcggcgtc
aagtttcatgacggttccgatttcaccgcggaagatgtcgtcttctcgctggatcgcccc
gccacgctgaccaacagccccggcccgttcaccagctataccaagcagatcgtcgctaaa
gaaatcgtcgatccgtacaccgtgcgcctgaaaacagcgacaccctacggcccgctggcg
ctggacgtaagcaccattttcatcgtctcaaagaaggcggcgcaaaacgcgaccactgaa
gacttcaacagcggcaaggcattgatcggtaccggtccgttcaagttcggcagcttcaag
cgcggcgacagcattgaactggtgcgtaacgacagctattggggcggcaaggccgactgg
gacaaagtcaccttccgtatcctgacctccgacggcgcgcgcctggccgcgttgctggca
ggcgaagtcgatgccatcgacagtgtgccgccggcagacgtgccgaagctgaagaccaat
ccaaagttcgaactggtgcaacgtacctcgtggcgcacgattttctggacactggatcag
tcccgcgacaagacgcctgatattaccgacaagtccggcaagccattggacaagaacccg
ctcaaggacatccgtgttcgccaggcgatctccaaggcgatcaaccgtcaggcgcttacc
gaacgcacactggaaggcctcggcacaccggcatcgaatatcgtcgcaccgggcatcctc
ggttatgccgacaacctgaaggtcgaaaaatatgatcctgaaggcgccaagaagctgctg
gcggctgccggctatccaaacggttttgcgctgacgctgcatggcccgaacaaccgctac
atcaacgatgaacgcgtcgtgcaaactgtcgcgcaattcctgagccgcgtcggcatccag
accaaggtcgaaaccttcccgctgtcggtctacttcggtaaagcacgcaatggcgacttc
agcgtttccctgctgggctggggtacactggcaggcgacttcggcctgcgtacactggtc
ggaacgaccgatgcaagcacaggctggggttcgtggaactggggtaagtacagcaatcca
caagtcgacaaactggtgcaatcctcgctggcatccgtggatgaaaagcagcgtcaggaa
ttcgccaagcaggcggcaaccgtggcactgactgactatgccgtgatcccactgcatcat
cagtacgcaacatgggccgtgcgcaagggcatcaagtacaccccacgtattgacgaattc
accttcgcacatcagttccatccgcaataa
DBGET
integrated database retrieval system
