Herbaspirillum sp. meg3: hmeg3_14185
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Entry
hmeg3_14185 CDS
T05024
Name
(GenBank) peptide ABC transporter
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
hee
Herbaspirillum sp. meg3
Pathway
hee02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hee00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
hmeg3_14185
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hee02000
]
hmeg3_14185
Transporters [BR:
hee02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
hmeg3_14185
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
ASU41445
UniProt:
A0A223PH78
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All DBs
Position
complement(3166076..3167656)
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AA seq
526 aa
AA seq
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MTVRSFLPSFNKGRRLLFQCAASAAVLLSAATLGMAPLAQAAAGGVANLAMVAEPQTLDP
MASTTDLVATIMQHVYEPLYTFDAKWNIQPMLAESLPKVSADGKTVTIELRKGVKFHNGK
EMKSDDVVASLKRWMDIAPRGKAVSKEIKSLDAKGPYTVVLSMQNAYAPLLAHLALPSGF
AAIMPKESAVNPLKDFIGTGPYQFKERKPDQYVLLTRFDGYSARKEAASGYAGKREALLS
ELRFIPVPNPNTRVEGSLSGQYQFADLLPAEASPRLAGKPNVVPVITAPFGFPYVVLNTV
QGPLQKQGVRQAIQAALNMKEIMTAGFGDPKFFSVEGNHFPKGSPFYSMDGTASYNQANA
AKARDLAAKAGYKGEPVKILTSKQYEFHYRMALVMGEELKLAGFKVDMQVVDWATLIQRR
NDPALWDIYMTHSAFLPEPTLSPPQLSDGAPGGWKSAGKDVSVTVFSHEMDPAHRGALWG
KVQSVVYDEVPYIRLGSFNSLTAKSSKLQGYTPMPWPYFWNTKLAD
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgacagtgcgatcttttttaccgtcgttcaacaagggcaggcgtctgctatttcaatgt
gcggcaagtgcggcggtgctgctgtcggctgccacattaggtatggcgccactggcgcag
gctgctgcgggcggcgtcgccaatctggcgatggtggccgaaccgcaaacactggatccg
atggcgtcgaccaccgatctggttgcgaccatcatgcaacacgtctatgagccgctctat
acctttgacgccaagtggaacatccagcccatgctggctgagagcctgccgaaggtgagt
gcggacggcaagaccgtcaccattgagctgcgcaagggcgtcaaattccacaacggcaaa
gagatgaagtccgacgacgtcgtcgcttcgctcaagcgctggatggacatcgcgccacgc
ggcaaagcggtatccaaagagatcaagagcctcgacgccaaaggtccttacaccgtcgtg
ctgagcatgcagaatgcctacgcgccgctgttggcgcatctggcgctgccgtccggtttt
gctgcgatcatgccgaaggaatctgcggtcaatccactgaaggacttcatcggtaccggc
ccttatcagttcaaggagcgcaagcctgatcaatacgtgctgctaacccgtttcgacggc
tacagcgcgcgtaaggaagctgccagcggttatgccggcaagcgtgaagccttgctctcc
gaactgcgcttcatccctgtaccgaatccgaatacccgtgttgagggctcgctctccggt
cagtatcagttcgccgatctgctgccggcagaagcatcgccgcgtctggcaggcaaaccg
aatgtcgtgccggtgatcactgcgccgttcggctttccctatgtggtgctgaacacggtg
caaggcccgctgcaaaagcagggcgtgcgccaggcgattcaggcggcgctgaacatgaag
gaaatcatgaccgccggtttcggcgatccgaagttcttctccgttgaaggcaatcacttc
ccgaagggctcgccgttctactccatggacggtacggcttcgtataaccaggccaatgca
gctaaagcccgcgatcttgccgccaaggctggttacaagggcgagccggtcaagatcctg
accagtaagcagtatgaattccactaccgcatggcattggtgatgggcgaagagctgaag
ctggccggcttcaaggtcgacatgcaagtggtcgactgggcgacgctgatccagcgccgc
aacgatccggcgctgtgggatatctacatgacgcactcggccttccttcccgaaccaaca
ctgtcgccgccgcaactgagcgacggcgcaccgggcggctggaagagcgccggcaaggac
gtatcggtcaccgtgttctcgcacgagatggatccggcacatcgcggcgcgttgtggggc
aaggtacagagcgtggtgtacgacgaagtgccgtatatccgtctgggcagcttcaacagc
ctgaccgcgaagtcgtccaagctgcaaggctacacaccgatgccttggccgtatttctgg
aataccaagctggctgactaa
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