Herbaspirillum sp. meg3: hmeg3_15340
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Entry
hmeg3_15340 CDS
T05024
Symbol
lptF
Name
(GenBank) LPS export ABC transporter permease LptF
KO
K07091
lipopolysaccharide export system permease protein
Organism
hee
Herbaspirillum sp. meg3
Pathway
hee02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
hee00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
hmeg3_15340 (lptF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hee02000
]
hmeg3_15340 (lptF)
Transporters [BR:
hee02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Lipopolysaccharide transporter
hmeg3_15340 (lptF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LptF_LptG
Abhydrolase_9_N
Motif
Other DBs
NCBI-ProteinID:
ASU39523
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All DBs
Position
complement(3401523..3402650)
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AA seq
375 aa
AA seq
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MIFERALRRELMSTAGAVFTTLFTIILTVMLIKILGQAAGGQVNSQDVLALIGFQALNYM
PIILILTGFISVLLVVTRSYQDSEMVVWFACGLSLTRWIKPVLRFGWPIILLTGILSFVA
TPWANQQSAQFRERFEKREDIARVSPGKFQESATANRIFFVEGISGDASKVKNVFVNTFR
DGKNSIVVAKEGEMEVDKDGEKFVVMSQGRRYDGVPTQPDFQMVEFERYGLLVGGQSQAA
AGEKSVRALQSWDLLMQNTSFSRGEMLWRLALPLMALTLILLAIPLSFVNPRAGRSIGLL
VALLLFVVYSNTVSVFQSSVGQNRISFMLGWWPPHLVVALIVVGLFFWRLKVNSRYHPAV
LWSGMRRALTLKRRS
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgatttttgagcgcgctcttcgacgcgaattgatgagcaccgccggcgcagtgttcaca
acgctatttaccatcatcctcactgtgatgttgatcaagatcctcggccaggcggccggc
ggacaagtcaactcgcaggacgtgcttgcgctgatcggcttccaggcactgaactacatg
cccatcattctgatcctcaccggttttatctcggtgctgctggtggtcacacgcagttat
caagactccgaaatggtggtctggttcgcctgtggtctgagcctgacgcgctggatcaaa
cctgtgctgcgtttcggctggccgatcattctgctcacgggcattctcagtttcgtggcg
acgccttgggccaaccagcaaagtgcgcagttccgcgagcgctttgagaaacgcgaagac
atcgcccgcgtctcgcccggtaaattccaggaatcggcaacggccaaccggatcttcttc
gttgaaggtatttccggcgatgccagcaaggtcaagaatgttttcgtcaacactttccgc
gacggcaagaacagcattgtggttgccaaagaaggggagatggaagtcgacaaagatggc
gaaaaattcgtcgtcatgagccaaggccgacgctacgacggcgtgccgacgcagcccgac
ttccagatggttgaattcgaacgctacggtttgctggttggtggtcaatcgcaagctgct
gccggcgaaaagtcggtacgggcgctgcaaagctgggatttgctgatgcagaacaccagc
ttcagccgtggggaaatgctgtggcgtctggctttgccgctgatggcgctgacactgatt
ttgctggcgattccgctgtccttcgtcaatccacgtgcgggtcgctccatcggcctgttg
gtcgcgctgctgctgttcgttgtgtatagcaataccgttagcgtattccaatcgtcggta
ggccaaaaccgcatctcgttcatgctgggatggtggccgccgcatctggtggtggcgctg
attgtggtcggtttgttcttctggcgactgaaggtcaacagtcgttatcatccggccgtc
ttgtggtccggcatgcgccgtgcgcttactctgaaacggcggagctga
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