Herbaspirillum sp. meg3: hmeg3_16500
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Entry
hmeg3_16500 CDS
T05024
Name
(GenBank) XylR family transcriptional regulator
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
hee
Herbaspirillum sp. meg3
Brite
KEGG Orthology (KO) [BR:
hee00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hee03000
]
hmeg3_16500
Transcription factors [BR:
hee03000
]
Prokaryotic type
Helix-turn-helix
LacI family
hmeg3_16500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PBP1_XylR
Peripla_BP_3
HTH_18
HTH_AraC
Peripla_BP_4
Peripla_BP_1
HTH_23
TetR_N
HTH_17
HTH_31
Motif
Other DBs
NCBI-ProteinID:
ASU39725
UniProt:
A0A223PC88
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Position
complement(3666155..3667408)
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AA seq
417 aa
AA seq
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MTRVPTVHRIALLFNGNKIFDRDIIAGIGEYLTSTRASWDLYLEEDFRCRLQGIERWQGH
GIIADFDDPATCEALAGVHLPVVAVGGSYADAADYPQAIPYVATDNFKLVKLAYDHLIEA
GLQNFACFSLPKADVNRWAQEREKAFEALMQRDGIQGHIYRGVGTSAPSWDTAVEQQIAW
VRSLPKPIGIIAVTDARARQLLQACLCAGIAVPEQVALIGIDNDPLARILTRVPLSSVIQ
GTVEMGRTAAHLLHQMLHGARFADTRILVPPAGINVLASSRHEARNHPHVMQAMHFIRQY
ACQGIKTEQVADYVGISRSSLEWYFRRELGRSVHDEILRFKLDAAKRLLQQADSNVADIA
VSCGFTSVQYMHAVFKRELGCTPREYQEQMAADAPPPVALPRKKSPAAASILREHNV
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
gtgacaagagtaccgaccgtgcatcgcatcgcgctactgttcaacggcaacaagatattc
gatcgcgacatcatcgccggcatcggcgaatacctcaccagcacacgcgcctcgtgggac
ttgtacctggaggaagactttcgctgccgcctgcaaggcatcgagcgctggcaaggtcac
ggcatcatcgccgacttcgatgaccccgccacgtgcgaagccctcgcgggagtacacctg
ccggtggtggccgttggcggctcctatgccgacgctgccgactatccgcaagctattccc
tacgttgcgaccgacaatttcaaactggtgaagctcgcctacgatcatctgatcgaagcc
gggctgcaaaattttgcctgcttcagcctgcccaaggccgacgtcaatcgctgggctcag
gagcgcgaaaaagccttcgaagcgctgatgcagcgcgacggtattcagggacatatctat
cgcggcgtcggcaccagcgcgccatcctgggataccgccgtcgagcagcagatcgcctgg
gtgcgcagcctgcccaagccgatcggcatcattgccgtgactgatgcacgcgcccgccag
ttgttgcaggcctgtttgtgcgcaggcattgcggtgcccgagcaagtggcgctgatcggt
atcgacaacgatccgctggcgcgcatcctgacgcgggtgccattgagttcggtgattcag
ggaacggtcgagatggggcgtacggcggcgcatctgctgcaccagatgctgcatggcgca
cgctttgccgacacgcgcatcctggtaccgccggccggcatcaacgtgctggcatcgagc
cggcacgaagcacgcaatcatccccacgtgatgcaggccatgcatttcattcgccaatac
gcctgccagggcatcaagacagagcaggtggccgactatgtcggcatctcgcgctcctcg
ctggaatggtacttccgccgcgaactggggcgcagcgtgcatgacgagatactgcgtttc
aaactggatgccgccaagcgcttgctgcaacaggccgacagcaatgtcgccgacatcgcc
gtcagttgcggcttcacctcagtgcaatacatgcacgccgtgttcaagcgcgaactcgga
tgcacgccacgggaatatcaggagcagatggccgctgatgcgccgccaccggttgcactc
ccaaggaagaaatctcccgctgctgcatcgatattgagagaacacaacgtgtaa
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