Herbaspirillum sp. meg3: hmeg3_16670
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Entry
hmeg3_16670 CDS
T05024
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
hee
Herbaspirillum sp. meg3
Pathway
hee03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hee00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
hmeg3_16670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hee03400
]
hmeg3_16670
DNA repair and recombination proteins [BR:
hee03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
hmeg3_16670
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
hmeg3_16670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_N
RecO_C
Motif
Other DBs
NCBI-ProteinID:
ASU39753
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All DBs
Position
complement(3699045..3699920)
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AA seq
291 aa
AA seq
DB search
MAEIIADTAVGQTLDAEALSAAATQSALDNAKNTAAPKRSTRVSSTPRRAKVPEKETRIQ
AQPGFVLHSYPYKETSLIVDVFSRDHGRVALVAKGAKRPHSALRGVLQTFQPLSVSWAGK
SEVRTLTIAEWVGGMLPLEKSALLCGFYLNELLVKLLARDDAHPALFDHYVSTLNQLAHG
ESAPIVLRKFERALLKETGVAGDWTRCVTNGKAVEPDEMYVVDPEQGVRFPRLSDVWPKV
SGKTLLDMEKEDYSDLNTQTQSKFLMRSLLSHHLGGAQLNTRQILIDLTQL
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atggctgagattatcgccgatactgcagttggtcagacactcgatgcagaagcactgagc
gctgctgcgacgcagtctgcgctggacaacgccaagaatacagccgcacccaaacgcagc
acgcgcgtatcctcaacgccgcgccgtgccaaggtgccggaaaaagaaacccgcatccag
gctcagccgggatttgtgctgcacagctacccctacaaagaaaccagcctgatcgttgac
gtgttttcacgcgatcatggtcgtgttgcactggtcgcgaaaggcgccaagcgtccgcat
tctgcattgcgcggcgtcttgcagacctttcaacctctgtcggtcagttgggccggcaag
tccgaagtacgcaccctgaccatcgctgaatgggtcggcggcatgctgccgctggaaaaa
tccgcgctgctgtgcggcttctatctcaatgaattgctggtcaaattgctggcgcgcgac
gacgcgcatccggcgctgttcgatcattacgtgtcgacgctcaatcagctcgcgcatggc
gagtctgctcccatcgtgctgcgcaagttcgagcgcgccttgctcaaggaaaccggtgtt
gccggcgactggaccaggtgtgtcaccaatggaaaagcggttgagccggacgaaatgtat
gtcgttgatccggagcagggtgtacgcttcccgcgcctgtctgatgtctggcccaaggtt
tccggcaagaccttgctcgacatggagaaggaagactacagcgacctcaacacgcagacg
cagagcaaatttctgatgcgctcgctgttgtcgcatcatctgggcggtgcgcaattgaat
acgcgacagattctgatcgatctgacgcaactctga
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