Herbaspirillum sp. meg3: hmeg3_16965
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Entry
hmeg3_16965 CDS
T05024
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
hee
Herbaspirillum sp. meg3
Brite
KEGG Orthology (KO) [BR:
hee00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hee03400
]
hmeg3_16965
Enzymes [BR:
hee01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
hmeg3_16965
DNA repair and recombination proteins [BR:
hee03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
hmeg3_16965
Prokaryotic type
hmeg3_16965
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
DUF2229
Motif
Other DBs
NCBI-ProteinID:
ASU39806
UniProt:
A0A223PCJ8
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All DBs
Position
3760992..3762488
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AA seq
498 aa
AA seq
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MPTFDSSLVWFRRDLRISDHAALYYALKQSKQVHCVFVYDRDILDALLADGLQADRRIDF
IMASITELDAALREAGGALIVRHASAQQDIPALAAELGVDAIFTNHDYEPQAIKRDAAVK
KQLEKDGRQLLTYKDQVIFEKDEVLSLAGRPFSVFTPYKNAWMNKLSGPGGDFYLKPYPV
DAYFAQLAPPSKKYHKALPTLEDLGFLPTNLKDLRIPTGMSGAAQLLEDFLPRLGKYGDT
RDFPAVKGPSYLSVHLRFGTISIRTLARTAVEAMRIGEGRRGAPVWLSELVWRDFYFMIL
FHHPRVVERSFKADYDAIQWEGGKHAREMFAKWCEGRTGYPLVDAAMLQLNQTGYMHNRL
RMVVASFLTKDLGIDWRWGEKYFADQLNDFDLSANNGGWQWASSSGCDAQPYFRIFNPIT
QSERFDAEGKFIRRYLPQLAGLPDKYVHAPWLCSADLLKSAGVKLGKDYPEPMVDHAEAR
KRTLLRYAVVKKDLGDED
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgccgactttcgattcctctctcgtctggttccgtcgcgatctgcgcatcagcgaccac
gctgcgctgtattacgcgctcaaacaaagcaagcaggtgcattgcgtgttcgtctatgac
cgcgacatcctcgacgcgctgctggccgacggcctgcaagccgatcgccgcatcgacttc
atcatggcctccattaccgaactcgacgccgccttgcgcgaggccggtggcgcactgatc
gtgcgccatgcctcggcgcagcaagatatcccggcgctggcggcagagcttggcgtcgac
gccatcttcaccaaccatgactacgaaccacaggcgatcaagcgcgatgcggcggtcaag
aaacaattggaaaaagacggccgccaattgctgacctacaaggatcaggtcatctttgaa
aaggacgaagtactgtcgctggcgggtcgtcccttctccgtcttcacaccgtacaagaat
gcatggatgaacaagctatccggtcctggcggcgacttctatctcaagccttatccggtg
gatgcctatttcgcacaactcgcaccaccttcaaagaaataccacaaggccttgccgaca
ctggaagacctcggctttctgccgaccaatctgaaagacttgcgtatcccgaccggcatg
tctggtgcagcacaattgctggaagacttcttgccgcgtttgggcaagtacggcgatacg
cgcgacttccctgccgtcaagggaccgtcctacctgtcggtgcatctgcgtttcggcacg
atctccatccgtacgctggcccgtactgccgtcgaggccatgcgcatcggcgaaggccgc
cgcggcgcgccggtgtggttgtcggaactggtgtggcgcgatttttatttcatgatcctg
ttccaccatccacgcgttgttgagcgctctttcaaggcggattacgacgcgattcaatgg
gaaggcggcaagcatgcgcgcgagatgtttgccaagtggtgcgaaggccgcaccggttac
cccctggtcgacgccgccatgctgcaactgaaccagaccggctacatgcacaaccgtctg
cgcatggtggtggcgagctttctgaccaaggacctggggatcgactggcgctggggcgag
aagtactttgccgatcagctcaatgacttcgacctgtcggccaacaacggcggctggcaa
tgggcgtcttcttcagggtgcgatgcgcagccgtatttccgtatcttcaatccgattacg
cagtcagagaggtttgacgcggaggggaagttcatccggcggtatctgcctcagctggcc
ggcttgccggataagtatgttcatgcgccctggttgtgttctgctgacttgttgaagtct
gccggggtcaagttggggaaggattatccggagcctatggtggatcatgcagaggcgcgg
aagaggacgttgttgaggtatgcggtggtgaagaaggatttgggggatgaggattga
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