Herbaspirillum sp. meg3: hmeg3_17080
Help
Entry
hmeg3_17080 CDS
T05024
Symbol
xdhB
Name
(GenBank) xanthine dehydrogenase molybdopterin binding subunit
KO
K13482
xanthine dehydrogenase large subunit [EC:
1.17.1.4
]
Organism
hee
Herbaspirillum sp. meg3
Pathway
hee00230
Purine metabolism
hee01100
Metabolic pathways
hee01120
Microbial metabolism in diverse environments
hee01232
Nucleotide metabolism
Module
hee_M00958
Adenine ribonucleotide degradation, AMP => Urate
hee_M00959
Guanine ribonucleotide degradation, GMP => Urate
Brite
KEGG Orthology (KO) [BR:
hee00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
hmeg3_17080 (xdhB)
Enzymes [BR:
hee01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.4 xanthine dehydrogenase
hmeg3_17080 (xdhB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MoCoBD_2
MoCoBD_1
Ald_Xan_dh_C
DUF745
Motif
Other DBs
NCBI-ProteinID:
ASU39827
UniProt:
A0A223PCQ1
LinkDB
All DBs
Position
3792231..3794603
Genome browser
AA seq
790 aa
AA seq
DB search
MNKQTEEFMSIKNPQTLSAWTEVGKPHPHESAILHVTGEATYTDDIVELQGTLHAALGLS
TKAHAKMRAIDLSKVKASAGVVAVYTADDIPGENQCGAIIKDDPVLADGLVQYVGQPIFV
VVADTHDNARRAARQAVIDYEELPSILTPRAAREAESYVLPPMHLSRGNPAEAFDKAPHK
LKGQFDVGGQEQFYLEGQISYAIPKEGRGMHVYCSTQHPSEMQHHIAHVLHVASHDVLVE
CRRMGGGFGGKESQSALWACAAAVAAVRLRRPVKLRADRDDDMIVTGKRHCFAYDYEIGY
DDNGRIVAAKIDMVSRAGFSADLSGPVATRAVCHFDNAYYLSDVEIHAMCGKTNTQSNTA
FRGFGGPQGAIAIEYIIDEIARNLGKDALEVRRANFYGSSDATGPDARNVTHYGQHVEDN
VIQALVNELERTSEYQERRKAIHTFNAENTILKRGLALTPVKFGISFNVPHLNQAGSLVH
VYTDGSVLVNHGGTEMGQGLNTKVAQVVANALGLPLDQVRCTATDTSKIANTSATAASTG
SDLNGKAAQDAALQIRARLAQVAAERFNTDVSEVRFADGMVTTGAQSVTFEELVMQAYLK
RVQLWSDGFYSTPKVHWNAKTMNGHPFFYFAYGAAVAEVVIDTLTGEWRLIRADSLYDAG
ESLNPAIDIGQVEGGFIQGMGWLTTEELWWNKDGKLMTHAPSTYKIPAVSDCPTDFRTHL
FKNSNVSDTIHRSKATGEPPLLLPFSVFLAIRDAVSAVGEHRINPPLRAPATSEAILDAI
DAVKATVAVQ
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagcaaactgaagaattcatgtccatcaagaatccgcaaaccttgtccgcctgg
accgaagtcggcaaaccgcatccgcacgaatccgccatcctgcacgtgaccggcgaggcc
acctacaccgacgacatcgtcgagttgcaaggcacactgcacgccgcgctcggcctgtcg
accaaggcgcacgcaaaaatgcgtgcgatcgatctgagcaaggtcaaggcttccgccggc
gtcgttgcggtgtataccgctgacgatatccccggtgaaaaccaatgcggcgccatcatc
aaggacgatccggtactggccgatggcctggtgcaatacgtcggccaaccgatctttgta
gtcgtcgccgacacgcacgacaatgcccgccgcgctgcgcgccaggccgtgatcgattac
gaagaactgccgtccatcctcacgccgcgtgctgcgcgcgaagccgaatcctatgtgctg
ccgccgatgcacctgtcgcgcggtaatcctgctgaggccttcgacaaggcaccgcacaag
ctcaagggtcagttcgacgtcggcgggcaggaacagttttatctggaaggccagatctct
tacgcgatccccaaggaaggccgcggcatgcatgtgtattgctcgacgcaacatccgagt
gaaatgcaacaccacatcgcccacgtgctgcacgtcgcctcgcatgacgtgctggtggag
tgccgccgcatgggtggcggtttcggcggcaaggaatcgcaatcggccttgtgggcctgc
gctgcggcagtcgctgcggtgcgcctgcgccgaccggtcaagctgcgcgccgaccgcgac
gacgacatgatcgtcaccggcaagcgccactgctttgcctacgattatgaaatcggctac
gacgacaacggccgcatcgttgccgcgaagatcgacatggtctcgcgcgccggtttctcg
gcggacttgtcgggccctgttgcaacccgcgccgtgtgccacttcgacaatgcctactat
ctgtcggacgtggagattcacgccatgtgcggcaagaccaacacgcaatcgaacaccgcc
ttccgcggcttcggcggtccgcaaggcgcgatcgccatcgaatacatcatcgacgaaatc
gcccgcaatctcggcaaggatgcactggaagtgcggcgtgccaatttctacggcagcagc
gatgcgacaggtccggatgcccgcaatgtcacgcattacggccaacacgttgaggacaac
gtgatccaggcgctggtcaacgagcttgaacgcaccagcgagtatcaggaacgtcgcaag
gccatccataccttcaatgcggaaaatacgatcctcaagcgcggtctggcgctgacgccg
gtgaagttcggcatctcgttcaacgtgccgcatctgaaccaggccggttcgctggtgcac
gtctataccgacggctcggtgctggtcaatcacggcggtacggaaatgggccagggcctg
aacaccaaggtggcgcaagtcgtcgccaacgccctcggcctgccgctggatcaggtgcgc
tgcaccgccaccgacaccagcaagatcgccaatacctcggccaccgccgcctccaccggc
agtgatctgaacggcaaggcggcgcaggatgccgcattgcaaatccgcgcacgcctggcg
caggttgcagccgaacgcttcaacaccgatgtcagcgaagtacgctttgccgacggcatg
gtgacgaccggtgcccagtccgtgacgtttgaagaactggtgatgcaggcttatctgaag
cgcgtgcaattgtggtcggacggcttctactcgacaccgaaggtgcattggaatgccaag
accatgaacggccatccgttcttctacttcgcttacggcgcagcagtcgccgaggtcgtg
atcgacacgctgaccggcgaatggcgcctgatccgcgcagactcactgtatgacgccggc
gagagcctgaacccggcgatcgacatcggccaggtcgaaggcggcttcattcagggcatg
ggttggctgacgaccgaagagctgtggtggaacaaggacggcaagctgatgacgcatgcg
ccgtcgacgtacaagattccggcagtgtccgattgcccgacggatttccgcacacacctg
ttcaagaacagcaacgtctcggataccatccaccgctccaaagcgaccggcgaaccaccg
ctgctgctgccattctcggtgttcctggcgatccgcgatgcggtgtcagcggtgggcgaa
catcgcattaatccgccgctgcgcgcaccggcgaccagcgaggcgattctggatgcgatt
gatgcggtgaaagccaccgtcgcggtgcaataa
DBGET
integrated database retrieval system
