Herbaspirillum sp. meg3: hmeg3_17215
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Entry
hmeg3_17215 CDS
T05024
Symbol
trpB
Name
(GenBank) tryptophan synthase subunit beta
KO
K01696
tryptophan synthase beta chain [EC:
4.2.1.20
]
Organism
hee
Herbaspirillum sp. meg3
Pathway
hee00260
Glycine, serine and threonine metabolism
hee00400
Phenylalanine, tyrosine and tryptophan biosynthesis
hee01100
Metabolic pathways
hee01110
Biosynthesis of secondary metabolites
hee01230
Biosynthesis of amino acids
Module
hee_M00023
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:
hee00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
hmeg3_17215 (trpB)
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
hmeg3_17215 (trpB)
Enzymes [BR:
hee01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
hmeg3_17215 (trpB)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PALP
Motif
Other DBs
NCBI-ProteinID:
ASU39851
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All DBs
Position
complement(3824108..3825367)
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AA seq
419 aa
AA seq
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MKELNPLGNFSERQPIAAAALHQTAPYNLPDARGHFGQYGGSFAAETLTDALTELREAYA
HYQNDEQFLAEFHTELKHFVGRPSPVYHAKRWSELAGGAQIYFKREDLNHTGAHKINNVI
GQALLAKRMGKKRIIAETGAGQHGVATATICARFGMECIVYMGSEDVKRQLQNVYRMNLL
GATVVPVESGSKTLKDALNEAMRDWVTNVESTFYIIGTVAGPHPYPMMVRDFQSVIGNEC
IVQMPEIASRQPDYVVAAVGGGSNAMGIFYPYIDYQDVKLVGVEAAGDGLDTGRHSASLT
LGTPGVLHGNRTYLLQDENGQIMETHSVSAGLDYPGVGPEHSWLKDSGRASYECITDDEA
LAAFHTCCRIEGIIPALESSHALAYAAKLAATLPKDRIVLANLSGRGDKDMHTVQQHQG
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaattgaatccgctcggcaacttttccgagcgtcagcctattgccgctgcagcc
ttgcatcagactgcgccctacaacctgccggacgcacgcggccacttcggccaatacggc
ggcagcttcgcagcggaaaccctgaccgacgcactcaccgagctgcgtgaagcctatgcg
cattaccagaacgacgaacagtttttggcagagtttcatactgagctgaaacattttgtc
ggccgtcccagccccgtgtatcacgccaagcgctggtccgaactggcaggcggcgcgcag
atctatttcaagcgtgaagacctgaatcacaccggcgcgcacaagatcaacaatgtcatc
ggtcaggcattgctcgccaagcgcatgggcaagaagcgcatcatcgccgagaccggcgca
ggccagcatggcgtggcgacagcaacgatctgtgcacgttttggcatggaatgcatcgtc
tacatgggcagcgaagacgtcaagcgccagttgcagaatgtctatcgcatgaatctgctg
ggcgcgacagtggtgccggtagaatccggttccaagacgctgaaggatgcactcaacgaa
gcgatgcgcgactgggtcaccaacgtggaaagtacgttctacatcatcgggacagtggct
ggtccgcatccctatccgatgatggtgcgcgacttccaatcggtgatcggcaacgaatgt
atcgtgcaaatgcctgagatcgccagccgtcagcctgactatgtggtggcggccgtcggc
ggcggctccaatgcgatgggtattttctacccctatatcgattatcaggacgtcaaactg
gtcggtgttgaagccgcgggcgacggtctcgataccggccgccattccgcctcgctgacg
ttgggtacgccaggcgtgctgcacggtaatcgcacttatctgctgcaggatgaaaacggc
cagatcatggaaacgcactcggtttcggcaggtcttgactatccgggtgttggtcctgag
cactcgtggttgaaagacagtggccgcgccagctatgaatgcatcaccgacgacgaggca
ttggcggcgtttcatacctgctgccgcatcgaaggtatcattcccgcgctggagtcgagc
catgcgctggcgtacgcggccaagctggcagcgactttgccgaaagaccgcattgtgctg
gccaatctgtcggggcgcggcgacaaggacatgcatactgtccagcaacatcagggttaa
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