Herbaspirillum sp. meg3: hmeg3_17735
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Entry
hmeg3_17735 CDS
T05024
Name
(GenBank) lysine decarboxylase
KO
K01584
arginine decarboxylase [EC:
4.1.1.19
]
Organism
hee
Herbaspirillum sp. meg3
Pathway
hee00330
Arginine and proline metabolism
hee01100
Metabolic pathways
hee01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
hee00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
hmeg3_17735
Enzymes [BR:
hee01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.19 arginine decarboxylase
hmeg3_17735
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Paralog
Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
DegT_DnrJ_EryC1
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
ASU39947
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Position
3947395..3949659
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AA seq
754 aa
AA seq
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MKFRFPIVIIDEDFRSENTSGLGIRALADAIKEEGMEVLGVTSYGDLSQFAQQQSRASAF
ILSIDDEEFGAGSSEETDFALKSLRAFVSEIRHKNADIPIYLYGETRTSRDIPNDILREL
HGFIHMFEDTPEFVARHIIREAKSYLDGLAPPFFRALVHYAQDGSYSWHCPGHSGGVAFL
KSPIGQMFHQFFGENMLRADVCNAVEELGQLLDHTGPVADSERNAARIFNADHCYFVTNG
TSTSNKMVWHSTVAPGDIVVVDRNCHKSILHSIIMTGAIPVFLMPTRNHLGIIGPIPLEE
FTMESIRKKIEANPFAREAVNKKPRILTITQSTYDGVVYNVETLKEMLDGEIDTLHFDEA
WLPHATFHDFYKDMHAIGKDRPRAKKSMIFSTQSTHKLLAGLSQASQILVRESETVQLDQ
DAFNEAFLMHTSTSPQYSIIASCDVAAAMMEAPGGTALVEESILEALDFRRAMKKIDQEF
GQDWWFQVWGPNSFSADGIGEREDWVIKAEDDWHGFGNLAPGFNMLDPIKATIVTPGLSL
DGKFGENGIPASIVTKYLAEHGVIVEKCGLYSFFIMFTIGITKGRWNTLVTALQQFKDDY
DKNQPIWRILPEFAAANQGRNARYERLGLRDLCQQIHETYRAYDVARLTTEMYLSDMQPA
MKPSDAFSKMAHREIDRVPLDELEGRVTSILLTPYPPGIPLLIPGEIFNKTIVDYLKFAR
DFNEKFPGFETDVHGLVKREVDGRRDYFVDCVRQ
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atgaaattccgtttccccatcgtcatcatcgacgaagatttccgctctgaaaacacttcc
ggtctgggcattcgcgccctggccgacgccatcaaggaagaaggcatggaagtactgggc
gtgaccagttacggcgacctgtcgcaattcgcgcagcaacaatcgcgcgcgtccgccttc
atcctgtcgatcgacgatgaagaattcggcgccggctcgtccgaagaaaccgatttcgcg
ctgaaatcgctgcgcgccttcgtcagcgaaatccgccacaagaacgccgacatcccgatt
tatctgtacggtgaaacccgcacctcgcgcgatatccccaacgatatcctgcgcgaactg
cacggcttcatccacatgtttgaagacacgcctgaattcgtggcccgccacatcattcgc
gaagccaagtcttacctcgacggcctggcgcccccgtttttccgcgcgctggtgcactac
gcacaggacggctcctactcctggcactgcccgggtcactcgggcggcgtagctttcctg
aagtcgccaatcggccagatgttccaccaattcttcggtgaaaacatgctgcgcgccgac
gtctgcaacgccgtggaagaactcggccagctgctcgaccacaccggtccggtcgccgat
tcggagcgcaatgctgcgcgcatcttcaacgccgaccactgctatttcgtcaccaacggc
acctcgacctccaacaagatggtctggcactcgacggtggcgcccggcgacatcgtggtc
gtcgaccgcaactgccacaagtcgatcctgcactccatcatcatgaccggtgcgattccc
gtcttcctgatgccgacgcgtaaccatctcggcatcatcggaccgattccgctggaagag
ttcacgatggaaagtatccgcaagaagatcgaagccaacccgttcgcgcgcgaagccgtg
aacaagaagccgcgcatcctgaccatcacgcaatcgacctacgacggcgtggtctacaac
gtcgagacattgaaagaaatgctcgacggcgaaatcgacaccctgcacttcgacgaagcc
tggctgccgcacgcgaccttccatgacttctacaaagacatgcacgccatcggcaaggac
cgtccacgcgccaagaagtcgatgattttctcgacccaatcgacgcacaagctgctggca
ggtctgtcccaggcatcgcagatcctggtgcgtgaatcggaaaccgtgcagctcgatcag
gacgccttcaacgaagccttcctgatgcacacctcgacttcgccgcaatactcgatcatc
gcttcgtgcgacgttgctgctgcgatgatggaagcgccgggcggcactgcgctggtggaa
gaaagtattctggaagcgctggatttccgccgcgccatgaagaagatcgaccaggaattc
ggtcaggactggtggttccaggtgtggggcccgaacagcttctccgccgacggcatcggc
gaacgcgaagactgggtcatcaaggcagaagacgactggcacggtttcggcaacctggcg
ccgggcttcaatatgctcgacccgatcaaggcgaccatcgttactcccggcctgtcgctg
gacggcaaattcggcgagaacggcatcccggcctcgatcgtcaccaagtacctggcggaa
cacggcgttatcgtcgagaagtgcggtctgtattccttcttcatcatgttcaccatcggc
atcaccaagggccgctggaacacgctggtgacggcgctgcagcagttcaaggacgactac
gacaagaaccagccgatctggcgcatcctgcccgagttcgccgccgcgaaccagggccgc
aacgcgcgctacgagcgcctgggcctgcgcgacctgtgccagcagatccacgaaacctat
cgtgcctacgacgtcgcacgcctgacgacagagatgtacctgtccgacatgcaaccggcg
atgaagccatccgatgcgttctcgaagatggcgcaccgcgaaatcgaccgcgtgccgctg
gacgaactggaaggccgcgtcacctcgatcctgttgacgccttaccctccgggcatcccg
ctgttgatcccgggcgaaatcttcaacaagaccattgtcgactacctgaagtttgcgcgt
gatttcaatgagaaattcccaggtttcgaaaccgacgtgcatggtctggtcaagcgtgaa
gtggatggccgccgcgattactttgtggattgcgtgcgtcaataa
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