Herbaspirillum sp. meg3: hmeg3_17960
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Entry
hmeg3_17960 CDS
T05024
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
hee
Herbaspirillum sp. meg3
Brite
KEGG Orthology (KO) [BR:
hee00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hee03032
]
hmeg3_17960
03036 Chromosome and associated proteins [BR:
hee03036
]
hmeg3_17960
03400 DNA repair and recombination proteins [BR:
hee03400
]
hmeg3_17960
DNA replication proteins [BR:
hee03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
hmeg3_17960
Chromosome and associated proteins [BR:
hee03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
hmeg3_17960
DNA repair and recombination proteins [BR:
hee03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
hmeg3_17960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
ASU39990
UniProt:
A0A223PD76
LinkDB
All DBs
Position
complement(4001340..4001645)
Genome browser
AA seq
101 aa
AA seq
DB search
MTKSELIARLAERYPQLVAKDADYAVKTILDAMVDALATGQRIEIRGFGSFALNRRPPRI
GRNPKSGDKVMVPEKRVPHFKPGKELRERVDAMVGQPIKED
NT seq
306 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagtctgagctgatcgctcgcctggctgagcgttatccgcaacttgtcgccaag
gatgcggattacgcggtcaaaaccatcctcgatgcaatggtcgatgcacttgcaaccggc
caacgtatcgagatccgtggttttggcagctttgcgttaaatcgcaggccgcctcgtatc
ggtcgcaatcccaagtcgggtgacaaagtgatggtgccggaaaagcgcgtacctcatttc
aagcccggcaaggaattgcgggagcgtgtcgacgccatggtggggcaacccatcaaggaa
gactaa
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integrated database retrieval system
