Herbaspirillum sp. meg3: hmeg3_18000
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Entry
hmeg3_18000 CDS
T05024
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
hee
Herbaspirillum sp. meg3
Brite
KEGG Orthology (KO) [BR:
hee00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hee03032
]
hmeg3_18000
03400 DNA repair and recombination proteins [BR:
hee03400
]
hmeg3_18000
Enzymes [BR:
hee01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
hmeg3_18000
DNA replication proteins [BR:
hee03032
]
Prokaryotic type
DNA Topoisomerases
hmeg3_18000
DNA repair and recombination proteins [BR:
hee03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
hmeg3_18000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
BLYB
Motif
Other DBs
NCBI-ProteinID:
ASU39998
LinkDB
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Position
complement(4010338..4013010)
Genome browser
AA seq
890 aa
AA seq
DB search
MDQFAKETIPISLEEEMRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNVWN
RPFVKCARVVGEVMGKYHPHGDASIYDTLVRMAQDFSLRYMLVDGQGNFGSIDGDGAAAM
RYTECRLDKIANELLADIEKETVDFDPNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT
NIPPHNITEVINGALHVLSNANCTIDELIELIPAPDFPTGGIIYGVSGVRDGYRTGRGRV
VMRAKTHFEEFGREGRTAIIVDELPYQVNKKALLERIAELVRDKKLDGISDLRDESDKSG
MRVVIELKRGEVPEVVLNNLYKQTQLQDTFGMNMVALVDRQPKLLNLKQMLECFLSHRRE
VVTRRTIFELRKARERGHVLEGLAVALANIDDFIAIIRAAPTPPIAKTELMARAWDSSVV
REMLSRTGAENTGGINAFRPENLPTHYGIQNDGLYKLSDDQAQEILQMRLQRLTGLEQDK
IVNEYKEVMEQIADLLDILSKPARVTAIITDELNAAKNDFGIGAKDERRSTIELNATDLG
TEDLITPQDLVVTLSHTGYMKSQPVSEYRAQKRGGRGKQAMATKDDDWIDQLFIANTHDY
ILCFSNRGRMYWLKVWEVPQGSRNSRGKPIVNMFPLQDGEKITVILPVSGENRTFPEDRY
VFMSTSLGTVKKTPLSDFSNPRKAGIIAVDLDEGDFLIGAALTDGQHDVMLFSDSGKAVR
FDENDVRPMGRTARGVRGMNLEEGQQVIALLVAENEQQSVLTATENGFGKRTPITEYTRH
GRGTKGMIAIQTSERNGKVVAATLVEASDEIMLITTGGVLIRTRVAEIREMGRATQGVTL
IAVEDGTKLSGLQRVVESDAEEDKLEDDAEGAVDSEGGAAAAGEGDAPAE
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atggatcaattcgccaaagaaaccatccccatttcccttgaagaagagatgcgcaagagc
tacctcgactacgcgatgagcgtaatcgtgggtcgtgctctgccggacgtgcgtgacggc
ctgaagccggtgcatcgccgcgtgctgtttgccatgcacgagatgaacaatgtctggaac
cgcccgtttgtgaagtgtgcgcgtgtggtcggtgaagtcatgggtaagtatcacccgcac
ggcgacgcttcgatttacgacacgctggtgcgtatggcgcaggatttttcgctgcgctac
atgctggtcgatggccagggaaacttcggctcgatcgacggtgacggcgctgcggcgatg
cgttacaccgagtgccgcctcgacaagattgccaacgagctgctggccgatatcgaaaaa
gaaactgtcgatttcgatcccaactacgacggtaaggaaaaagaaccttcggttctgccg
actcgcatccccaatctgctgattaacggttcgtccggtatcgcggtgggtatggcgacg
aacattcctccgcacaacatcaccgaagtcatcaatggcgcgctgcacgtgttgtcgaac
gccaattgcacaatcgatgagctgatcgagctgattcccgcgccggacttcccgacgggc
ggcatcatctatggcgtctccggcgtgcgcgatggttatcgcaccggccgtggtcgcgtg
gtcatgcgcgcgaagacgcatttcgaagagttcggccgcgaaggccgcactgcgatcatc
gtcgacgagctgccgtatcaggtcaacaagaaggcgttgctggaacgtatcgctgaactg
gttcgcgacaagaagctggacggtatttccgatctgcgcgacgagtccgacaagtccggt
atgcgcgtcgttattgagctcaagcgcggtgaagtgcctgaagtcgtgctgaacaatctg
tataagcagacacaattgcaagacaccttcggcatgaacatggtggcgctggtggatcgt
cagccgaagctgctgaacctgaagcagatgctggaatgcttcctgtcgcaccgtcgtgaa
gtcgttacacgccgtactatttttgaactgcgcaaagcgcgcgagcgtggtcacgtcctg
gaaggtctggcggttgcgctggccaatatcgatgacttcatcgcgatcatccgtgcggct
ccaacgccgccgatcgcgaagacagaactgatggcgcgcgcctgggattcttccgttgta
cgcgaaatgttgtcccgtaccggtgccgaaaacaccggcggcatcaatgccttccgtccg
gaaaatctgccgacgcattacggtattcaaaacgacggcctgtacaagctgtcggacgat
caggcgcaggaaatcctgcaaatgcgtctgcaacgtctgaccggtctggagcaagacaag
atcgtcaacgagtacaaggaagtcatggagcagatcgccgacttgctggatattctgtcc
aagccggctcgcgttactgcgatcatcaccgacgaactgaacgccgccaagaacgacttc
ggcatcggcgccaaggacgagcgtcgttcgaccattgaactcaacgccaccgacctcggc
acggaagacctcatcacgccgcaagatctggtcgtgaccttgtcgcacacgggatacatg
aagtcgcaaccagtttccgaataccgcgcgcaaaaacgcggcggccgcggcaagcaagcc
atggcgaccaaggacgacgactggatcgaccaactgttcatcgccaatacgcacgattac
atcctgtgcttctccaaccgtggccgcatgtattggctgaaggtgtgggaagtgccgcaa
ggatcgcgcaattcgcgcggcaagccgatcgtcaacatgttcccgctgcaagacggagaa
aaaatcacggtcattctgccggtctccggcgagaaccgtactttcccggaagaccgttat
gtcttcatgtcgaccagcctcggcactgtcaagaagacgccgttgtccgacttcagcaat
ccacgcaaggccggcatcattgcggtcgacctcgatgagggcgacttcctgatcggtgcg
gcgctgactgacggacagcacgacgtcatgttgttctccgactccggcaaggcggtgcgc
tttgacgaaaacgacgtgcgtccgatgggccgtacggcacgcggcgtgcgcggcatgaat
ctggaagaaggtcagcaggttatcgcgttgctggttgccgagaatgaacagcaatccgtt
ctgacggcgactgaaaacggcttcggcaaacgtacgccgattaccgaatatacccgtcac
ggccgtggcaccaagggcatgatcgcgatccagaccagcgaacgcaacggcaaggtcgtc
gcggcgacattggttgaggccagcgatgaaatcatgctgatcacgactggtggtgtgttg
attcgtacccgcgtcgcggaaatccgcgaaatgggacgtgcaacacaaggcgtgacgctg
attgcagtggaagacggcaccaagctgagcggtctgcagcgtgtggttgagtctgatgct
gaagaagacaagctcgaagacgatgccgaaggcgcagttgattccgaaggcggtgctgca
gctgccggagaaggcgatgcacctgcggaataa
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