Herbaspirillum sp. meg3: hmeg3_18675
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Entry
hmeg3_18675 CDS
T05024
Name
(GenBank) bifunctional diguanylate cyclase/phosphodiesterase
Organism
hee
Herbaspirillum sp. meg3
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Gene cluster
GFIT
Motif
Pfam:
EAL
CHASE
GGDEF
PAS_9
PAS_3
PAS
PAS_4
PAS_8
PAS_7
Motif
Other DBs
NCBI-ProteinID:
ASU40112
UniProt:
A0A223PDK9
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Position
complement(4147208..4150321)
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AA seq
1037 aa
AA seq
DB search
MNWVRQILLPLVILISGFSVTWLAWDHERQASNKELRAQFDFSLREAVSRVEQRIASYEQ
MLHGVQGLVVSSGKFDRTAFHDYVSSLNLDANFSGIQAIGAEEWLPSDEKINHIARMHQL
GFSDYAIRPAGDRANYAPIIMREPYIGNNRAPFGYDPWSETKRRRAMEKARDSGMAAISG
KVLLDIDNGNEAQPSFLMYLPIYAHGMPQSTIEERRTNLVGWVHASFRMSDVIASLYGEQ
PMGVAFSIYDGVEPSPEAVLYRSVGSDAAAAPLHNDAISATEYLVVAGHNWTLTMNTMDD
FNVRYGRNAEAQTAVTGIGLTLLLALLAWALMSSRRRAIRLAGKMTRELRASEEQFRAIA
DCTVNWEIWWGMDGKPRWINPSVKEYTGYTVEECMAMDDLRAQMIYAEDLPRVGPELDKG
LLGERGDDLEFRCVRKDGSLFWLSASWVPINDANGALAGYRTSGRDITERKQVEAELRIA
AVAFDSLEGIMVTDAESRILRVNNAFAKMTGYSAAEIIGLTPDVLRSDRHSPQFYDEIWE
TVQRFGGWQGEVWTRRKNGKVFPEWLTISAVKSDDGSTTHYVGTHHDITERKIAEERIKE
LAFFDALTRLPNRTLLLDRLKQAIAVSARNKTCSALLFIDLDHFKTLNDTLGHDKGDLLL
KQVAQRLALSVRTNDTVARVGGDEFVVVLESLHKSPQEAATQTKAIGEKILSVLDEPYQL
EDVEYRTTASVGATVFRGRQASIDELLKQADLAMYKSKETGRNSMSFFDPAMQTVVLERA
ALEAGLRKAIDGGQLVLHYQAQVVEGGRVTGAEVLVRWQHPQRGTVPPGEFIPLAEETGL
ILSLGNWVMETACTQLARWAERVDTSHLTIAVNVSAQQFRESDFVETVSAIIARTGANPK
RLKLELTESLLVDNVEDIIQKMYALKAKGVEFSLDDFGIGYSSLSYLKRLPLNQLKIDQS
FVRDVLVDPNDASIAKTIVALAQSLGLGVIAEGVETDAQRSFLADAGCHAYQGYFFCRPL
PLEDFEKFVQEVDPILE
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
gtgaactgggtcaggcagatactattgccgctggtgattctgatctccggcttcagcgtc
acctggctggcgtgggatcacgaacgccaggcctccaacaaggagctgcgggcgcagttt
gatttttccttgcgcgaggcggtcagccgcgtggagcaacgcatcgccagctatgagcaa
atgctgcatggcgtgcaaggcctggtggtctcttcaggcaagtttgatcgtactgccttc
cacgactacgtcagctcgctgaatctggacgccaatttttccggtatccaggccatcggc
gccgaagagtggctgcccagtgacgagaagatcaatcacatcgcgcgcatgcatcaactc
ggtttttccgattacgcaattcgccctgccggcgaccgcgccaactatgcgccgattatc
atgcgcgaaccttatatcggtaacaatcgcgcgccgttcggctacgatccctggtccgaa
accaagcgccgccgggcaatggagaaggcgcgtgactccggcatggccgccatctccgga
aaggtgctgctggatatcgacaacggcaatgaagcgcagccgagtttcctcatgtatctg
ccaatctatgcgcacggcatgccgcagtcgaccattgaagaacgccgtaccaatctggtc
ggctgggtgcatgcctcgttccgcatgagcgacgtgattgccagtctgtatggcgagcag
ccgatgggtgtggcgttttccatttatgatggcgtggagccgtcgccggaggcggtgttg
tatcgctccgtgggcagtgatgccgccgccgcgccgctgcacaacgatgcgatatccgcc
accgagtatctggtcgtggccggtcacaactggacactgaccatgaacaccatggacgac
ttcaacgtacgctacggccgtaacgccgaggcgcagactgcggtcaccggtatcggcctg
accttgctgctggctttgctggcgtgggcgctgatgtcgagccgccgccgcgcgattcgt
ctggccggcaagatgacgcgcgagctgcgcgccagtgaagagcaattccgcgccatcgcc
gactgtaccgtcaactgggaaatctggtggggcatggacggcaagccgcgctggatcaat
ccatcggtcaaagagtacaccggctacacggtggaagaatgcatggcgatggacgatctc
agagcgcagatgatctacgctgaagatctgccacgtgtggggccggagctggataagggc
ctgcttggcgaacgcggcgacgatctcgaattccgttgcgtgcgcaaagacggttcgctg
ttctggttgtcggcatcatgggttccgatcaacgacgccaacggcgcactggccggctac
cgtaccagcggacgcgacatcaccgaacgcaaacaggttgaagccgagttgcgcatcgcc
gccgtggcattcgactcgctcgaaggcatcatggttaccgatgcagaaagccgtatcctg
cgcgtcaataacgccttcgcaaaaatgacgggctattccgccgccgagatcatcggcctg
acgcccgacgtgttgcgctcggatcgtcacagtccgcagttctatgacgagatctgggaa
accgtgcaacgcttcggcggctggcagggtgaggtatggacgcgccgcaagaacggcaag
gtttttccggaatggctgaccatttctgccgtcaagagcgatgacggcagcaccacgcac
tatgtcggtacgcatcacgacatcaccgaacgcaagatcgccgaagagcgcatcaaggag
ctggccttcttcgatgcactgacgcgtctgcctaatcgcacgctgctgctggatcgcctc
aagcaggcgattgccgtcagtgcgcgcaacaagacatgcagcgctttgctgttcatcgat
ctggatcatttcaagacgctcaacgacacgctcggccacgacaagggcgatctgttgctc
aagcaagtcgcgcagcgcctcgcgttgagcgtgcgcaccaacgatacggtagcgcgcgtg
ggcggcgacgagttcgtggtggtgctggagagtctgcacaagagtccgcaggaagccgcc
acccagaccaaagccatcggcgaaaaaatcctcagcgtgcttgacgagccgtatcagttg
gaagacgttgaataccgcaccaccgccagcgttggcgcaaccgtattccgcggccgccag
gcatccatcgacgagctgctcaagcaagccgatctggccatgtacaaatccaaggaaacc
ggccgcaactccatgagtttcttcgatccggccatgcaaaccgtggtgctggaacgagca
gcgctggaagccggcttgcgcaaggcgatcgacggtggacagctggtattgcattatcag
gcgcaagtggtcgaaggcggtcgcgtgaccggcgccgaggtgctggtgcgctggcagcat
ccgcaacgcggtacggtgccgccgggtgagtttatcccgctggcagaggagaccggcctg
atcctgtcgctgggcaactgggtcatggaaaccgcttgtacgcaactggcacgctgggca
gagcgtgtggatacctcgcacctcaccatcgccgtcaacgtcagtgcgcaacagttccgc
gaatccgatttcgtcgagacggtttctgccatcatcgccagaaccggcgccaatcccaag
cgcctgaagctggagttgaccgagagccttctggtcgacaacgttgaagatatcatccag
aagatgtacgcactgaaggccaagggtgtcgagttttcgctggacgatttcggtatcggc
tactcctctttgtcctacctcaagcgcttgccgctgaaccagcttaaaatcgaccagtcg
tttgtgcgcgatgttcttgtcgaccccaacgatgcctccattgccaagactattgtcgcg
ctcgcgcaaagtctgggactgggagtcatcgccgagggcgtcgagacggatgcgcaacgc
agtttcctggccgatgcagggtgccatgcctatcaaggctatttcttctgccggccattg
cccctggaagattttgaaaaattcgtccaggaagtcgatcccatactggagtaa
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