Herbaspirillum sp. meg3: hmeg3_19130
Help
Entry
hmeg3_19130 CDS
T05024
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
hee
Herbaspirillum sp. meg3
Pathway
hee02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hee00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
hmeg3_19130
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hee02000
]
hmeg3_19130
Transporters [BR:
hee02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
hmeg3_19130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
SBP_bac_1
SBP_bac_11
Motif
Other DBs
NCBI-ProteinID:
ASU41548
LinkDB
All DBs
Position
4257517..4258536
Genome browser
AA seq
339 aa
AA seq
DB search
MLALLGTGLLTLAVSPAHAEKRTLVLSAYPIAQPLFNKYVYAPFKEKCGCEIVVETGNNA
DRIAKLDARRDNPVVDLVLLSDFGMLEASRKGLIQPLDYSKLKNYSQIYPFARNPIGGNY
AVGYTIYSVGLVYRTDKIKSLTSWKDLWRDDMKGRIALPDVSTTQGPLALQMADIAWGGK
TENFSTGMQKILAIKNNVVTFSKNSAQLSSLFAQDEIWAAPVARFTWAQLMKTGMPLKWS
IPAEGQAAGMNVMGIVNKSKNADLAYQLMDFWLSKEVQTALAMELVDSPVNTQVVLPKDK
AEFNTYGGEHIASLKFVKPETLLKHRSAWLEQWNKGISK
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgcttgcccttctcggtacgggcctgctcaccctggcagtctccccagcccatgccgag
aaacggacgctggtattgtccgcctacccgatcgcacagccgctgttcaacaagtacgtg
tatgcgccgttcaaggaaaaatgcggctgtgaaatcgtggtggaaaccggcaacaacgcc
gaccgtatcgccaagctggatgcacgtcgcgacaatccggtggtcgatctggtgttgttg
tcggacttcggcatgctggaagcctcgcgcaaaggcttgatccagccgctcgactacagc
aagctcaagaactacagccagatctatccgttcgcacgcaaccctatcggcggcaactac
gcggttggttacaccatttattccgtcggtctggtgtatcgcaccgacaagatcaagtcg
ctgacctcatggaaagacctgtggcgcgacgacatgaagggccgtatcgcgctgcccgac
gtcagcaccacgcaaggcccgctggcgctgcaaatggctgacatcgcctggggcggcaag
acggaaaacttcagcaccggcatgcaaaagatcctggccatcaagaacaacgtggtgacc
ttctccaagaacagcgcgcagttgtcttcgctgtttgcacaggatgaaatctgggccgca
ccggtggcgcgcttcacctgggcgcaactgatgaagaccggcatgccgctgaaatggagc
atcccggccgaaggtcaggccgccggcatgaacgtgatgggtatcgtcaacaaatccaag
aacgccgatctggcttaccagctgatggatttctggctgtcgaaagaagtacagaccgca
ctggcgatggagctggtcgactcgcctgtgaacactcaggtcgtgctgccgaaagacaag
gccgagttcaacacttatggcggcgagcacattgcctcgctcaagttcgtcaaacccgaa
accttgctcaagcatcgctcggcatggctggagcaatggaacaagggcatcagtaaataa
DBGET
integrated database retrieval system
