Herbaspirillum sp. meg3: hmeg3_19525
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Entry
hmeg3_19525 CDS
T05024
Name
(GenBank) helicase I
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
hee
Herbaspirillum sp. meg3
Brite
KEGG Orthology (KO) [BR:
hee00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hee03400
]
hmeg3_19525
Enzymes [BR:
hee01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
hmeg3_19525
DNA repair and recombination proteins [BR:
hee03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
hmeg3_19525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
ASU40264
UniProt:
A0A223PE02
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All DBs
Position
complement(4344313..4347054)
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AA seq
913 aa
AA seq
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MLHSPLLISPSVDFWPQTAAALLDADHALGQVVRAGSRDFSGCQVVVPAFSHAVHWRAAL
AQALTKIAPGTRAFIPPRINTMAGWLAMQEPEPATADSERLMQLYAQLRQHGWLKKMFTA
RRNTDLLPLAQTLLSLSDELTQALLPAMEKAPGDADERWQAALNQLSPSARSMLSDEAQL
VWSIWKSQLDGNDKTARRYARMLALAQQPRHGALAPLIWISPVAPEPMELAFLEAYAEHA
DVQPVVIDWRGPDIPLLYQTAWPELCDAPLAPMPDDLFAPQMDAPTMALCPAGSLEEASQ
QSALIVLDWLRQGKQDIAIVAQDRVSARRLRALLERAEVSVADETGWKLSTTRAAAALAA
WCDVVTSRGETTALLDLLKSPFIFAGMADKPAAVMQIEWQLRRQNIAGEWRSILAVFNNE
SAAADCLNAMARQATVFEGRKSLSAWSDCAQQLLDALDMRRAFEDDTAGQQALQLLQDLG
DDSARNADGSELFSFAEWRALLNLQLDAVTFMPPITDRRVVMLPLNGARLRNFDAVLVIG
ADAEHLPSQPQETLFFSNAVRHELGLPTRLSRQHQQLRDLTELLCANREVVLSWQTHKDG
EPNPMSPWLERMELCLARAGMEPIRVLRHQLPLQQLQAEPASMPTPSAPTLLPSKLSASG
YNTFVACPYQFFALRMLRVSVMDELSDMPQKRDYGGWLHEILMTYHETVRDQKTPLEQRA
ALLAAISDEIFGKAISQHPAALGYAARWQKVMPAYLVWANDREGQGWHFAFGEIALQHML
EWPGGGIELYGRLDRVDENTEGERAVLDYKTRPLPSLVTKLKDAEDHQLPFYGLLSGQTM
AAAHYVALETFKDKTGDIAITATDFERQQQALQQQISTVMQAVTQGAPLPANGIESVCQY
CEVRGLCRKGVWQ
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atgcttcattcgcccttgctgatcagcccgtccgtcgatttctggccgcaaaccgcggcc
gcgctgctggacgccgatcatgcgctgggccaggtcgtgcgggccgggtcgcgcgacttt
tccggctgccaggtggtggtgccggcgttttcgcatgcggtgcactggcgcgcggcgctg
gctcaggcgctgacgaagatcgctcccggcacgcgcgcgttcatcccgccgcgcatcaac
accatggccggctggctggcgatgcaggagcccgaaccggcaaccgccgacagcgagcgg
ttgatgcagctgtatgcacaattgcgccagcatggctggctcaagaagatgttcaccgcc
cgccgcaataccgatctgctgccgttggcgcaaacactgttgtcgctctcggacgaactc
actcaggcgctgctgcccgctatggaaaaagcgcccggcgatgccgatgagcgctggcaa
gcagccctgaatcaattgtcgccatcggcgcgcagcatgctctcggacgaggcgcaactg
gtctggtcgatctggaagagccagctcgacggcaacgacaagaccgcacgtcgctacgcc
cgcatgctggccctggcgcaacagcctcggcatggtgcgctggcgccgctgatctggatc
agcccggtcgcgccggagccgatggaactggccttcctcgaagcctatgccgaacacgcc
gacgtgcagccggtcgtcatcgattggcgcggcccggatattcctctgctctatcagacc
gcctggccggaattgtgcgatgcgccattagcgccgatgcctgacgatctgttcgcgccg
cagatggatgcgccgaccatggcgctgtgcccggccggcagtctcgaagaagcatcacaa
caaagcgcgctgatcgtgctcgactggctgcggcaaggcaagcaggacatcgccatcgtc
gcccaggatcgcgtcagcgcccgccgtttgcgcgccctgctagagcgcgccgaggtttcc
gtcgccgacgaaaccggctggaagctttccaccacgcgcgccgccgctgcgctggccgca
tggtgcgacgtcgtcacttcgcgcggcgaaaccaccgcgttactggatttgctgaagtcg
ccgttcatcttcgccggcatggcggacaagcccgcggccgtgatgcagattgaatggcaa
ttgcggcgccagaacattgccggcgaatggcgcagtatcctcgccgtcttcaacaatgag
tccgccgctgccgactgcctcaacgccatggcccggcaagcgacggtattcgaaggccgc
aagagcctgtccgcatggagcgactgtgcccagcaactgctggatgcgctcgatatgcgc
agggcattcgaagacgacaccgcaggtcagcaggcgctgcaattgctgcaggatctggga
gatgacagtgcgcgcaatgccgacggcagcgaactgttttcttttgccgaatggcgcgct
ttgctgaatctgcaactcgacgccgtgaccttcatgccgccgatcaccgatcgccgcgtg
gtcatgctgccgcttaacggcgcgcgtctgcgtaacttcgacgctgtgctggtgatcggc
gccgatgccgaacatctgccgtcgcagccgcaggaaacactcttcttttctaacgccgtg
cgtcacgaactcggcttaccgacacgcctgagccgccagcatcagcaattgcgcgacctc
accgaactgctgtgcgccaatcgcgaagtggtcttgagctggcagactcacaaggacggc
gaacccaatcccatgagtccgtggctggaacgcatggagctgtgcctggcaagagccggc
atggagccgatccgggtgctgcgccatcaactgccgttgcagcaattgcaggcggaaccg
gcaagcatgccgacgccatcggcgcccacgctgctgccgtccaaactgtcggccagcggt
tacaacacctttgtcgcgtgcccatatcaatttttcgcactgcgcatgctgcgcgtgagc
gtcatggacgagctgtctgacatgccgcaaaagcgcgactacggtggctggctgcatgag
atcctgatgacctatcacgagaccgtgcgcgaccagaaaacgccgctggagcaacgcgcg
gccctgcttgctgcgatctccgatgaaatattcggcaaagccatcagccagcatccggct
gcactcggctacgctgcgcgctggcagaaggtcatgcccgcgtatctggtgtgggcgaat
gaccgcgaagggcagggctggcatttcgcctttggtgaaatcgccttgcagcacatgctg
gagtggccgggtggcggcatcgaattgtacggacgtctcgaccgcgtcgacgagaatacc
gaaggcgagcgcgccgtactcgactacaagacgcgccctttgccgtctctggtcaccaag
ctgaaggatgccgaagatcatcagttgccgttctacggtttattgtccgggcaaaccatg
gcggccgcgcattacgtcgcactggaaaccttcaaggataaaaccggcgatattgctatt
actgcaacggatttcgagcggcagcagcaagccttgcaacaacagatcagtaccgtcatg
caagccgtcacgcagggtgcaccgctgcccgccaacggcattgaatcagtttgtcagtat
tgcgaagtacgaggcctgtgccgcaaaggagtgtggcaatga
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