Herbaspirillum sp. meg3: hmeg3_19775
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Entry
hmeg3_19775 CDS
T05024
Name
(GenBank) DNA mismatch repair endonuclease MutL
KO
K03572
DNA mismatch repair protein MutL
Organism
hee
Herbaspirillum sp. meg3
Pathway
hee03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hee00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
hmeg3_19775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hee03400
]
hmeg3_19775
DNA repair and recombination proteins [BR:
hee03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Molecular matchmaker
hmeg3_19775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-ProteinID:
ASU40309
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Position
4406293..4408191
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AA seq
632 aa
AA seq
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MNAPDRPTRPIRPIQALPDQLISQIAAGEVIERPSAVVKELLENALDAGATQITVRLEQG
GVKRIAITDNGRGIPPEQMPLALARHATSKIASLTDLENVGTLGFRGEALASIASVAQLT
LTTRTADAAHAWEITGSQEGNVVPASGAPGTTIDVQDLYFNTPARRKFLKSEQTEYGHCA
EVVRRIALARPDVTFSLTHNGKTVDHWNIGEFAKRSAHILGDEFANARLPVDESAGPLRI
HGFIGLPTASKARADGQYFYVNGRFVRDKLLVHAVRAAYQDVLHGDRYPSYALALDLDPA
LVDVNVHPSKIEVRFRDSRSVHQFVFHAVSRALAATSATSFGNAPAPQAAGNGPLPWMRD
QTQQPYQQPQHQAEFGAQLRPNFSAGGFGVAQNTADYGAMFRPGVQTNLDMASAADSETH
TGAFTMPIAANMQSLPADDFPLGFALAQLHGIYVLAQNSKGLVVVDMHAAHERILYEQLK
NALDDNSMFVQPLLIPVTFYADAVEVGTAEEHQDTLSALGFDIAAMSPTTLAVRAVPALL
KNADAQTLARDVLRDVREFGGSRVLLERRNELLGTLACHTAVRANRSLTVPEMNALLRQM
EATERADQCNHGRPTWSQLALSDLDKLFLRGQ
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcaccagatcgccctacccgccccattcgccccatccaggccctgcccgaccag
ttgatctcgcagatcgctgcaggcgaggttatcgaacgtccttccgctgtcgtcaaggaa
ctgctcgaaaacgccctcgatgccggcgccacgcaaatcaccgtgcggctggagcaaggc
ggcgtcaagcgtattgccatcaccgacaacggccgcggcattccgcccgagcagatgcct
ctcgcgctggcgcgtcatgcgacgtccaaaatcgcctccctgaccgatctggaaaacgtc
ggtaccctcggcttccgtggcgaggcattggcatcgatcgcatcggttgcgcaactgaca
ctgaccacgcgtactgccgatgcggcccatgcgtgggaaatcaccggctcgcaggaaggc
aatgtcgtccccgcatccggtgcgcccggcaccaccatcgatgtacaggatttgtatttc
aatacccctgcgcgccgcaagtttctgaaatcggaacaaaccgaatacggccactgcgcc
gaggtcgtgcgccgcattgcgctggcgcgtcccgacgtcaccttctcgctgacgcataac
ggcaagaccgtcgaccactggaacatcggcgagtttgccaaacgcagcgcgcatattctc
ggcgacgaattcgccaacgcccgtctgccggtcgacgaaagcgccggccctttgcgcatt
catggtttcatcggtttgccgaccgcctccaaggcgcgcgccgacggccagtatttttac
gtcaacggccgctttgtgcgcgacaagttgctggtgcacgccgtacgcgccgcctatcag
gacgtgctgcacggcgaccgctatccgtcgtacgcactggcgctggatctggatccggca
ctggtcgacgtcaatgtgcatccgtccaagattgaagtgcgcttccgcgacagccgcagc
gtgcatcaattcgtctttcacgccgtcagccgcgcgctggctgcgacctccgcaacctca
ttcggcaatgcgcccgcaccacaagcggctggcaacgggccgttgccgtggatgcgcgat
caaacccaacaaccctatcagcagcctcagcatcaggcggagttcggcgcacagctgcgt
ccgaatttttcggcaggcggttttggcgttgcgcagaataccgccgattacggcgcaatg
ttccgtcccggcgtgcagaccaatctggacatggcatctgcagcggacagcgaaacacat
accggcgcattcaccatgcccatcgccgccaatatgcaaagcctgccggccgacgacttc
ccgctcggcttcgcgctggcgcaattgcacggcatctacgtgctcgcgcaaaacagcaag
ggcctggtcgtggtcgacatgcatgccgcgcatgaacgcatcctgtacgagcaattgaag
aatgcgctcgatgacaacagcatgttcgtgcaaccgctgctgatcccggtgaccttctac
gccgacgcggtcgaagtcggcacggcggaagaacatcaggacacgctgagcgcgctcggc
ttcgatatcgcggcgatgtcgccgaccacgctggcagtgcgcgccgtaccggcgctgctg
aagaacgccgatgcccagacgctggcgcgcgatgtgctgcgcgatgtgcgcgaattcggc
ggctcgcgcgtgctgctggagcgccgtaacgaactgctcggcacattggcctgccacacg
gccgtgcgcgccaatcgcagcctcaccgtcccggaaatgaacgcgctgctgcgccagatg
gaagccaccgaacgcgcagaccagtgcaaccacggccgcccgacctggagccagctggcc
ctgtccgatctggacaaactcttcctgcgcggtcaataa
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