Herbaspirillum sp. meg3: hmeg3_20150
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Entry
hmeg3_20150 CDS
T05024
Name
(GenBank) succinate--CoA ligase subunit beta
KO
K01903
succinyl-CoA synthetase beta subunit [EC:
6.2.1.5
]
Organism
hee
Herbaspirillum sp. meg3
Pathway
hee00020
Citrate cycle (TCA cycle)
hee00640
Propanoate metabolism
hee00660
C5-Branched dibasic acid metabolism
hee00720
Other carbon fixation pathways
hee01100
Metabolic pathways
hee01110
Biosynthesis of secondary metabolites
hee01120
Microbial metabolism in diverse environments
hee01200
Carbon metabolism
Module
hee_M00009
Citrate cycle (TCA cycle, Krebs cycle)
hee_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
hee00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
hmeg3_20150
00640 Propanoate metabolism
hmeg3_20150
00660 C5-Branched dibasic acid metabolism
hmeg3_20150
09102 Energy metabolism
00720 Other carbon fixation pathways
hmeg3_20150
Enzymes [BR:
hee01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
hmeg3_20150
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Motif
Pfam:
ATP-grasp_2
Ligase_CoA
Citrate_synth_N
ATP-grasp_5
CPSase_L_D2
GARS_A
Citrate_bind
ATP-grasp
DUF7923
Motif
Other DBs
NCBI-ProteinID:
ASU40376
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All DBs
Position
complement(4476924..4478090)
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AA seq
388 aa
AA seq
DB search
MKIHEYQGKEILRQFGVTVPRGIPCQSVEDAVKAAETLGGPVWVVKAQIHAGGRGKGGGV
KVAKSLEQVKEYANQILGMQLITHQTGPEGQKVRRLLIEEGADIKKELYVSMVTDRVSQR
VVLMASSEGGMDIEEVAESHPELIHQIAIDPSTGLTDADADSIATKIGVPAASVVDARKQ
LQGLYKAYWETDASLAEINPLILTGDGKVIALDAKFNFDSNALFRHPEIVAYRDLDEEDP
AEVEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVGGGATTEKVTE
AFKIMLKNPELKAILVNIFGGIMRCDVIAEGVIAASKAVSLKVPLVVRMKGTNEEIGKKL
LADSGLPIISADSMEEAAQKVVAAANGK
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatccatgagtatcagggcaaagaaatcctccgccaattcggcgtgaccgttcca
cgcggcattccgtgccaatccgtcgaagatgctgtcaaggcagctgaaacgctgggcggt
ccggtgtgggtcgtcaaggcgcaaatccacgcgggtggccgcggcaagggcggcggcgtt
aaagttgccaagtccctggagcaagtcaaggaatacgccaaccagatcctcggcatgcag
ctgatcactcaccaaaccggcccggaaggccaaaaggtgcgtcgcctgctgatcgaagaa
ggcgcagatatcaagaaagaactgtacgtttcgatggttaccgatcgcgttagccaacgt
gtggtcctgatggcatccagcgaaggcggcatggacatcgaagaagtggcagaaagccac
ccagaactgattcatcagatcgctatcgatccatcgaccggtctgactgacgctgatgct
gacagcatcgcaaccaagatcggcgttccagccgcttccgtggttgatgcacgtaagcaa
ctgcaaggtctgtacaaggcatactgggaaaccgatgcatcgctggccgaaatcaatcca
ctgatcctgaccggcgacggcaaggtcatcgctctggacgcgaagttcaacttcgactcc
aacgcactgttccgtcatccggaaatcgtcgcttaccgcgatctggacgaagaagatcca
gctgaagtcgaagcttcgaagttcgatctggcttacatctccctcgacggcaacatcggc
tgcctggtcaacggcgctggtctggcaatggcaaccatggacaccatcaagctgtttggc
ggcgaacctgccaacttcctggacgtcggcggtggcgcaacaacagaaaaggttaccgaa
gcattcaagatcatgctgaagaacccagaactgaaagccatcctggtcaacattttcggc
ggcatcatgcgctgtgacgtgatcgccgaaggcgtgatcgctgcgtccaaggctgtttcc
ctgaaagtgccactggtcgtgcgcatgaagggcaccaacgaagaaatcggcaagaagctg
ttggccgactccggcctgccaatcatttcggcagacagcatggaagaagctgcgcaaaaa
gttgttgctgcagccaacggtaaataa
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