Herbaspirillum sp. meg3: hmeg3_21045
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Entry
hmeg3_21045 CDS
T05024
Name
(GenBank) BMP family ABC transporter substrate-binding protein
KO
K10439
ribose transport system substrate-binding protein
Organism
hee
Herbaspirillum sp. meg3
Pathway
hee02010
ABC transporters
hee02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
hee00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
hmeg3_21045
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
hmeg3_21045
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hee02000
]
hmeg3_21045
Transporters [BR:
hee02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
hmeg3_21045
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_3
DUF1131
Motif
Other DBs
NCBI-ProteinID:
ASU40541
LinkDB
All DBs
Position
complement(4670227..4671168)
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AA seq
313 aa
AA seq
DB search
MIKRRALNIAIGLTFAMGLGSVAHAEDIYIPLISKGFQHQFWQAVKAGANQAATDYKVKV
TFEGPETEAMVDKQIDMLSAALAKKPQAIGFAALDSKAALPLLKKAQAAKIPVVAFDSGV
DSDIPVTTATTDNKAAAALAADKMAELIGKEGEVAVVAHDQTSRTGIDRRDGFVDRMKAA
YPKIKIVSIQYGAGDQLKSTEVTKSILQAYPKLKGAFGTNEGSAIGVLNGAKEMKRKVVI
IGFDSGKQQKDAIRDGQMAGAITQNPVGIGYKTVEAAVKALKGEKLPKIIDTGFYWYDKS
NIADPKIAAVLYD
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgataaagagaagagcactcaacattgccatcggtttgactttcgccatgggcctgggc
agcgtcgcacacgctgaagacatctacattccgctgatttcaaagggcttccagcatcag
ttctggcaagcagtgaaggcaggcgccaaccaggccgccacggactacaaggtcaaagta
acgttcgaaggtccggaaaccgaagccatggtcgacaagcagatcgacatgttgtctgcc
gcgctggcgaagaagccgcaggcaatcggctttgccgcactcgacagcaaggctgcgctc
ccgttgctgaagaaggcgcaagccgccaagatcccggtcgtcgcatttgactccggtgtt
gacagcgatattcccgtcaccactgccaccaccgacaacaaggctgctgctgcactggcc
gcagacaagatggcggaactgattggcaaggaaggcgaagtcgccgtggttgcccacgat
cagaccagccgtaccggcatcgaccgtcgcgacggttttgtcgatcgcatgaaggctgcg
tatccaaagatcaagatcgtcagcatccagtacggcgcaggcgatcaattgaagtccacc
gaagtcaccaagtccatcctgcaagcctatccaaaactcaagggcgccttcggcaccaat
gaaggttcggccatcggcgtgctgaatggcgccaaggaaatgaagcgcaaggtcgttatc
atcggcttcgactccggcaagcagcagaaggatgcgattcgtgatggtcagatggccggc
gcgatcacgcaaaaccctgtcggcatcggttacaagaccgtcgaagcagcagtgaaggcg
ctcaagggcgagaagctgccgaagatcatcgataccggtttctactggtacgacaagagc
aacatcgccgatccgaagattgcggcggtgctgtacgactga
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