Herbaspirillum sp. meg3: hmeg3_21185
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Entry
hmeg3_21185 CDS
T05024
Name
(GenBank) polysaccharide biosynthesis protein
KO
K24300
UDP-N-acetylglucosamine 4,6-dehydratase [EC:
4.2.1.135
]
Organism
hee
Herbaspirillum sp. meg3
Pathway
hee00541
Biosynthesis of various nucleotide sugars
hee00552
Teichoic acid biosynthesis
hee01100
Metabolic pathways
hee01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
hee00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
hmeg3_21185
00552 Teichoic acid biosynthesis
hmeg3_21185
Enzymes [BR:
hee01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.135 UDP-N-acetylglucosamine 4,6-dehydratase (configuration-retaining)
hmeg3_21185
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Gene cluster
GFIT
Motif
Pfam:
Polysacc_synt_2
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
CoA_binding_3
3Beta_HSD
PglD_N
ThiF
adh_short
KR
NAD_binding_10
NmrA
Motif
Other DBs
NCBI-ProteinID:
ASU40565
UniProt:
A0A223PEM9
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Position
complement(4704819..4706708)
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AA seq
629 aa
AA seq
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MSVVATWSAFSLRLDILHWPQGYQWHVYQMAPLIAVPIFIRLGLYRAVFRYTGLSAMIAI
AKAVAIYGLTLFTLLFWLALPDVPRSVGLLQPLLLLIMVGSSRAFARFWLNHIVANQRDR
KDSRLLIYGAGGAGAQIASALTQRHQSILIGFLDDDSQLHGKTINGQRVYKPDDIEDLVS
RYGVTDVLLALPSVTRSRRNEILAALRKYQVHVRSLPDLTDLAHGTVTVSDIRELDILDL
LGRDPVPPNLELIGRHISGKTVLVTGAGGSIGGELCRQIMVAKPTRLLLLDHNEFSLYTI
HRELETKLEETQQRIELVPLLGSVRDYRRLSEICKTWKPHTVYHAAAYKHVPLVEHNPVE
GIRNNVLGTYNLARAATENGVSDFVLISTDKAVRPTNVMGATKRLAEMILQALSINDYPV
FDVDASVSPVVSNKTRFSMVRFGNVLGSSGSVIPLFRQQIKDGGPITVTDVNVTRYFMTI
PEAAQLVVQAAAMADGGDVFVLDMGDSVKIIDLARRMIRLSGLTIRDDDNPYGDIEIKVT
GLRPGEKLYEELLIGDHPQPTMHVRIMKAHEDFLAWNVLTKELQILFNAADNNDIDTISR
MLAKLVSGYTPVNDVVDLVYLAEGVEGSQ
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtcgtggcaacgtggagtgctttttccttgcgtcttgacatattgcattggccg
caaggctatcaatggcatgtctatcagatggcaccgctaattgcagtaccgatttttatc
cggttaggattgtaccgagcggtatttcgctataccggcttgtctgcaatgattgcaatt
gccaaggcggtggcaatttatggactcactctgtttactctgcttttctggttggcatta
cctgatgtgcctcggtcagtcggactgctgcagccactcttgctcctgatcatggtcgga
agtagcagagcatttgcacggttttggttgaatcatatagtagcgaatcaacgtgaccgg
aaggattccaggctattgatttatggcgcgggaggggccggggcgcaaattgcgagcgct
ttgacacaacgacatcaatcaatattgattggttttctcgacgatgatagtcagttgcat
gggaagacgattaacggccaacgggtttataagccggatgacatcgaagatctggtatcc
cgatacggtgttacggatgtcttgcttgcattgccgagtgtcacgcgtagccgtcgtaat
gaaattttggccgctctgcgaaaatatcaggtgcatgtacgatcgctaccggatctgaca
gatctggcacatggaaccgtgaccgtgtctgatatccgtgagttggatatacttgatttg
ctagggcgcgatcccgtacctccgaatcttgagttgattgggcgtcacataagcggaaaa
acagtcttggttaccggagcaggaggcagtattggcggtgagctgtgccggcagatcatg
gtggcaaagccaacgagattgctgcttcttgatcataacgaattcagcttgtatacaatc
catcgagagcttgagaccaagctggaagagactcagcaaaggatagagcttgtgccgttg
ctcggcagtgtgcgtgactatcgccgcctcagtgagatctgcaaaacttggaaacctcat
actgtctatcacgcagcagcatacaagcatgtccctctcgtcgagcataatccagtagag
gggatccgtaataacgttcttggtacctataatttagctcgtgctgccaccgaaaatggg
gtcagtgattttgtgctgattagtacagacaaggccgtacgaccgacaaatgtcatgggc
gcgacgaagcgtctcgcggaaatgattttgcaagcattgtccatcaatgactatcccgta
tttgatgtcgatgcttctgttagcccagtagttagcaacaaaacgcgtttttccatggtg
agattcggcaatgtacttgggtcatccggctcggttattccgttgtttcgtcaacagatc
aaggatggtggtccaataaccgttactgatgtcaatgtgacgcgctacttcatgacaatt
ccagaagcggctcaattggttgtccaagcggcggcaatggctgatggcggcgacgtgttt
gtacttgatatgggggattcggtaaaaatcatcgatctagcgcggcggatgattcgtttg
tccgggctcacgataagagatgatgacaatccctatggggacatcgagatcaaggtaacg
ggcttacgccccggagaaaaactttatgaagagctcctgatcggtgatcatccccagcca
accatgcatgtacgaatcatgaaagcgcatgaagattttctcgcttggaatgtgttgaca
aaagaactgcaaatattgttcaacgctgccgataacaacgatatcgatacaatttctcgg
atgttggccaaactagtctcaggatataccccagtcaatgacgttgttgatctggtctat
ctagcagaaggtgtagaaggttcgcagtaa
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