Herbaspirillum sp. meg3: hmeg3_21265
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Entry
hmeg3_21265 CDS
T05024
Symbol
rfbG
Name
(GenBank) CDP-glucose 4,6-dehydratase
KO
K01709
CDP-glucose 4,6-dehydratase [EC:
4.2.1.45
]
Organism
hee
Herbaspirillum sp. meg3
Pathway
hee00541
Biosynthesis of various nucleotide sugars
hee01100
Metabolic pathways
hee01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
hee00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
hmeg3_21265 (rfbG)
Enzymes [BR:
hee01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.45 CDP-glucose 4,6-dehydratase
hmeg3_21265 (rfbG)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
RmlD_sub_bind
NAD_binding_4
3Beta_HSD
Motif
Other DBs
NCBI-ProteinID:
ASU41586
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All DBs
Position
complement(4721633..4722724)
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AA seq
363 aa
AA seq
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MENLEMTLFADIYRGKRVLITGHTGFKGSWLTLWLSELGAQVTGIALAPATTPSHWQLLE
LPVDDAPLDITDAASLAAELQKTQPEVVFHLAAQPLVRRSYRDPLETWSTNVIGTANLLE
ACRHCTSVKAIVVITTDKCYENREWEWGYRETDRLGGHDPYSASKAAAELVVGSYRQAFF
AKAGAPLLASARAGNVIGGGDWSEDRLIPDIVRAVSEKTVLKIRSPGATRPWQHVLESLS
GYLLLGQKLLEEQQEFAQAWNFGPEADGNRTVEDVLIRLQKAWPAISWSVAGGELPHEAN
LLHLDSAKAKSRLGWCPVWPLEQTLTATAQWYRSYVENSAVISAAQLRAYIDAANAAGLA
WTR
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
ctggaaaacctggaaatgactctttttgccgatatttaccgtggcaagcgagttctaatc
actgggcacaccggttttaagggtagctggttgacactgtggttgtccgagctgggcgcg
caagtgaccggcatcgctctggcgccggcaactacgccatcacattggcagttgctggaa
ttgcctgtcgatgatgcgccgctggacatcaccgacgccgcgtcgctggctgctgagctg
cagaaaacgcaaccggaggtcgtgtttcatctggcggcgcaacctctggtacgccgttca
taccgagatccccttgagacttggtcgacgaatgtaataggcaccgccaatctgctggag
gcttgccggcattgcaccagtgtgaaggcgattgtcgttattaccaccgacaaatgctac
gaaaatcgcgagtgggaatgggggtatcgtgagactgatcgactaggtggacacgatccc
tatagtgcgtccaaagccgcggccgaattggtcgtcggcagttatcgacaggcgtttttt
gctaaagcgggggcgcctttattggcgagcgcacgtgccggtaatgttattggcggtggc
gattggtccgaagatcgcctcattcctgacatagtgcgtgcggtatccgaaaaaacagtt
ctgaagatccgctcacctggcgctacaaggccgtggcagcatgtgctggagtcactgtcc
ggttatctgctgcttgggcagaagctgcttgaagagcaacaggaatttgctcaggcctgg
aacttcgggccggaagcagatggaaaccgcacggttgaagatgtcctcatccgtttgcag
aaggcatggcccgcgatttcctggagtgtggcgggaggtgagctccctcatgaagccaat
ctactgcatcttgatagcgccaaagccaaatcacggctgggttggtgtccggtatggccc
ctggagcagacgctaaccgcgaccgcgcaatggtatcgctcttatgtggaaaatagtgca
gtcattagtgctgcgcagttgcgtgcgtacatagatgctgcgaatgccgcaggccttgcg
tggaccagataa
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