KEGG   Herbaspirillum sp. meg3: hmeg3_21835
Entry
hmeg3_21835       CDS       T05024                                 
Name
(GenBank) signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
hee  Herbaspirillum sp. meg3
Pathway
hee02024  Quorum sensing
hee03060  Protein export
hee03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:hee00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    hmeg3_21835
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    hmeg3_21835
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    hmeg3_21835
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:hee02044]
    hmeg3_21835
Enzymes [BR:hee01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     hmeg3_21835
Secretion system [BR:hee02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   hmeg3_21835
  Eukaryotic Sec-SRP protein
   hmeg3_21835
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N Zeta_toxin CbiA AAA_22 AAA_30 T2SSE AAA_33 AAA_16 AAA_19 AAA_31 YqeC APS_kinase ResIII cobW nSTAND3 Thymidylate_kin 6PF2K AAA_14 KTI12 ATP_bind_1 TsaE Rad17 AAA_18 GTP_EFTU
Other DBs
NCBI-ProteinID: ASU40680
UniProt: A0A223PF57
LinkDB
Position
4848158..4849525
AA seq 455 aa
MLDNLTQRLAKVVKTMRGEARLTESNTAEMLREVRLALLEADVALPAVREFIAKVKEKAV
GEEVIGSLTPGQALVGVVQRELASLMGADLGPEASQLNFATQPPAIILMAGLQGAGKTTT
VGKLAKYLRENKKKKVLTVSADVYRPAAIGQLETVTGQAGADFFPTKTTDKPVDIALAAL
DYAKRHFHDVLIIDTAGRLGIDEAMMQEISAVHAAVKPIETLFVVDAMLGQDAINTAKAF
SDALPLTGIVLTKLDGDSRGGAALSVRHITGKPIKFAGVAEKLDGLEAFDPSRMANRILG
MGDILALVEEARKGVDVAAAQDLAQKIKSGGKFDLNDFKAQLGQMKKMGGMAGLLDKLPA
QMQQAAGNANMDQAEKQVRRMEGMINSMTLQERAKPELIKATRKRRIAAGAGVQVQEVNR
MLAQFEQMQTMMKKLKGGGMMKMMRSMKGMMPGMR
NT seq 1368 nt   +upstreamnt  +downstreamnt
atgctcgacaatctgacccaacgccttgccaaagtcgtcaaaaccatgcgcggcgaggcg
cgcctgaccgaatccaataccgccgaaatgctgcgcgaagtacgtctggcgctgctcgag
gccgacgttgccctgcctgccgtgcgcgagttcatcgccaaggtcaaggaaaaagccgtc
ggcgaagaagtcatcggctcgctgacgccaggccaggcgctggtcggcgtggtgcagcgc
gaactggccagcctgatgggtgccgaccttggcccggaagcatcgcagcttaacttcgcc
acccagccgccggcaatcatcctgatggccggtctgcagggtgcgggtaaaaccaccacc
gtcggtaagctcgccaagtacctgcgcgaaaacaagaagaaaaaagtcctgacggtctcc
gccgacgtctaccgtccggctgcgatcggccagttggaaaccgtgaccggccaggccggc
gccgacttcttcccgaccaagaccactgacaagccggtcgacatcgctttggcagcactc
gattatgccaagcgccatttccatgacgtcctgatcatcgacaccgccggccgcctgggt
atcgacgaagcgatgatgcaagaaatcagcgccgtgcacgctgccgtcaaaccgatcgaa
accctgttcgtggtcgacgccatgctcggccaggacgccatcaacaccgccaaagccttc
agcgacgctctgccgctgaccggtatcgtccttaccaaactggacggcgactcgcgcggt
ggtgcagcgctgtcggtgcgtcacatcaccggcaagccgatcaagtttgccggcgtagca
gaaaagctggacggtctggaagccttcgatccgagccgcatggccaatcgtattctcggc
atgggcgacatcctggcgctggtcgaagaggcccgcaaaggcgtcgacgtcgcagctgca
caagatctggcgcagaagatcaagagcggcggcaagttcgatctcaacgatttcaaggcg
cagctcggccagatgaaaaagatgggcggcatggccggcctgctcgacaagctgccggcc
cagatgcagcaagccgccggcaacgccaatatggaccaggctgaaaagcaggtgcgccgc
atggaaggcatgatcaattcgatgacgctgcaggagcgcgccaagcccgaactgatcaag
gccacccgcaagcgccgcatcgctgccggcgccggtgtccaggtacaggaagtcaaccgc
atgctggcccagttcgagcaaatgcaaacgatgatgaaaaagctcaagggcggcggcatg
atgaagatgatgcgcagcatgaagggcatgatgccgggcatgcgttaa

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