Herbaspirillum sp. meg3: hmeg3_22020
Help
Entry
hmeg3_22020 CDS
T05024
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
hee
Herbaspirillum sp. meg3
Pathway
hee00470
D-Amino acid metabolism
hee00550
Peptidoglycan biosynthesis
hee01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hee00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
hmeg3_22020 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
hmeg3_22020 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hee01011
]
hmeg3_22020 (murD)
Enzymes [BR:
hee01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
hmeg3_22020 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
hee01011
]
Precursor biosynthesis
Amino acid ligase
hmeg3_22020 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
NAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
ASU40715
UniProt:
A0A223PF44
LinkDB
All DBs
Position
complement(4885449..4887581)
Genome browser
AA seq
710 aa
AA seq
DB search
MNYVDKHALVLGLGESGLAMAQWLVYCGARVRVADTREEQAVAERLAVLKTVSAESEFVG
GKAFAAELLDGIDFVAVSPGLAPERDLAVLSAAAAERNIPLWGEMELFAQALAALREERA
YTPKVLAITGTNGKTTVTSLTGMLCRRAGLTTKVAGNISPAALDVLREALIEDAAHAIVV
AAQRAEEEAAAQAEAEAAAVIAEQQAQAQAEAQAEIDAAAAKEAAAAQAAAEEASRQLEL
TEQAEAAESAESAEAETASPEQASAEASNASNGAEHEPSVQAAHIGLNDSLTVTVAAPNE
DEDVEAAADSVDASASQEPAAEMTTEETGAESAASHDAEIVDAEDVAVSAQVSLLDEDDS
TPLQLELPPPEPERVYEGILPQAWVLELSSFQLHTTYSLQADAATVLNITQDHLDWHGNM
DAYTADKARIFGEKTVRVLNRDDAAVMAMAAPGATVSSFGLDEPKKAGSFGLVDENGMLW
LAAAVAIEDEEKPEGRRRKKDPKEVVEQPFLLKRLMPVDALKIRGLHNASNGLAALALCR
AADLPLANLLHGLRDYTGEPHRVELVMTIREVEYYDDSKGTNVGATVAALNGLGHGGKPN
RLLLIAGGDGKGQDFSPLAEPLSKYGRAVFLIGRDAGAIRTAVADTGIELIDCTTLEEAV
EKAADMAQGGDAVLLSPACASLDMFRNYAHRAEVFVDAVREVALSRGEVM
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgaattacgtcgataaacacgctctggtacttggactgggtgaatccggtctggcgatg
gcgcagtggctggtctactgcggtgcgcgcgtgcgtgtggccgatacccgcgaagagcag
gccgtggcggagcgcctggccgtgctgaagactgtatcggcagagagtgaattcgtcggc
ggcaaggcctttgcggcagaactgctggacggtattgatttcgtcgccgtcagcccgggc
ttggcgccggagcgcgacctggccgtgttgtctgcggcagcagcagaaagaaatatcccc
ctgtggggcgagatggaattgttcgcgcaagccctggcggctttgcgtgaagagcgcgcc
tatacgcccaaggtgttggccatcaccggcaccaacggcaaaaccaccgtcaccagtctg
accggcatgctatgccgccgtgcgggattgacgaccaaggtcgccggcaacatcagcccg
gctgcattggatgtcttgcgcgaagcactgatcgaagatgcagcccacgctatcgtggtt
gctgcgcaacgcgccgaagaggaagcggcagcgcaggctgaggcggaagctgctgcagtt
atcgcagaacaacaggcacaagcgcaagctgaagctcaggcagaaatcgacgccgccgcc
gcgaaggaagccgctgcagcacaagctgccgcggaagaagcatcgcgccagctggagctg
actgagcaagccgaggctgctgaatctgctgagtctgctgaagctgaaacggcatcacca
gaacaagcgtctgctgaggcatcgaatgcatccaacggagcagagcatgagccgtcggtg
caagccgctcatattggtctgaatgacagcttgacggttaccgtcgccgcgccgaacgag
gatgaggatgtcgaagccgcagcagattctgtcgatgcctcggcgtcgcaagaacccgca
gccgaaatgaccactgaagaaacaggcgcagagtccgccgcttcacatgatgcggaaatt
gtggacgcggaagatgttgctgtctcagcacaggtttcacttctcgacgaagacgacagc
acgccactccagctcgaattgccgccaccggaaccggagcgggtgtacgaaggcatcctg
ccgcaagcatgggtgctcgagttgtcgagcttccagctgcacacgacttatagcttgcag
gccgatgccgcgaccgtactgaacattacgcaagaccatctggactggcacggcaatatg
gatgcctacaccgccgataaggcgcggattttcggcgagaagactgtgcgcgtactcaat
cgcgacgatgccgccgtgatggcgatggccgcgcccggcgccaccgtatccagttttggt
ctggacgagccgaagaaggcaggcagtttcggtctggttgatgaaaacggcatgctgtgg
ctggccgcggctgttgcaatcgaagatgaagaaaaacccgaaggccgtcgccgcaagaaa
gatccgaaagaagtcgtcgaacagcctttcctgctcaagcgcctgatgccggtcgatgca
ttgaagatccgcggtttgcacaatgcctccaacggtctggccgcactggcattgtgccgt
gccgccgatctgccgttggcgaacttgttgcacggcttgcgcgactacacgggcgagccg
catcgcgtcgagctggtgatgacaattcgcgaagtggaatattacgacgacagcaagggc
accaatgtcggtgctaccgtggctgcgttgaacggtctcggccatggcggaaagcccaat
cgtctgttgttgatcgccggtggcgatggcaagggccaggatttttcgccgctggcagag
ccgttgtcgaaatatggtcgtgccgtgttcctgatcggtcgcgacgccggcgccattcgt
actgcagtcgccgacaccggtatcgaactgatcgattgcacaacgctggaagaagctgtc
gaaaaagccgccgacatggcgcaaggtggtgacgccgtgctgctgtcgccggcctgcgcc
agtctggacatgttccgcaactatgcccatcgcgcggaagtcttcgtcgacgcggtgcgt
gaagtggccttgtcgcgcggtgaggtgatgtga
DBGET
integrated database retrieval system
