Herbaspirillum sp. meg3: hmeg3_22060
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Entry
hmeg3_22060 CDS
T05024
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
hee
Herbaspirillum sp. meg3
Brite
KEGG Orthology (KO) [BR:
hee00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hee03032
]
hmeg3_22060
03036 Chromosome and associated proteins [BR:
hee03036
]
hmeg3_22060
03400 DNA repair and recombination proteins [BR:
hee03400
]
hmeg3_22060
DNA replication proteins [BR:
hee03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
hmeg3_22060
Chromosome and associated proteins [BR:
hee03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
hmeg3_22060
DNA repair and recombination proteins [BR:
hee03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
hmeg3_22060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-DNA_bdg
HU-CCDC81_euk_2
BclA_C
PT-TG
TBPIP
Motif
Other DBs
NCBI-ProteinID:
ASU40722
UniProt:
A0A223PF89
LinkDB
All DBs
Position
4895948..4896232
Genome browser
AA seq
94 aa
AA seq
DB search
MNKSELVDAIAADTEISKAAAQRALDSVVENIIKAVTKGDTVQLVGFGSFSTGKRAARTG
RNPQTGEEIKIAAATTVKFSAGKSFKEAVNKKKK
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaaatccgaattggtcgacgcaatcgctgctgatacagaaatctcgaaggctgct
gcacaacgtgctttggactccgttgttgaaaacatcatcaaggcagttaccaagggcgac
acagtgcaactggttggcttcggttctttctccacaggcaagcgcgctgctcgtaccggc
cgtaacccacaaactggcgaagaaatcaaaatcgctgctgcaactacagtgaagttctcc
gctggtaagtcgttcaaagaagcagtgaacaagaagaagaaataa
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