Herbaspirillum sp. meg3: hmeg3_22350
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Entry
hmeg3_22350 CDS
T05024
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase
KO
K07516
3-hydroxyacyl-CoA dehydrogenase [EC:
1.1.1.35
]
Organism
hee
Herbaspirillum sp. meg3
Pathway
hee00071
Fatty acid degradation
hee00362
Benzoate degradation
hee00650
Butanoate metabolism
hee01100
Metabolic pathways
hee01120
Microbial metabolism in diverse environments
hee01200
Carbon metabolism
hee01212
Fatty acid metabolism
Module
hee_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
hee00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
hmeg3_22350
09103 Lipid metabolism
00071 Fatty acid degradation
hmeg3_22350
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
hmeg3_22350
Enzymes [BR:
hee01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
hmeg3_22350
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
3HCDH
ECH_1
ECH_2
NAD_binding_2
NAD_Gly3P_dh_N
Motif
Other DBs
NCBI-ProteinID:
ASU40769
UniProt:
A0A223PFC1
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Position
complement(4969072..4971459)
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AA seq
795 aa
AA seq
DB search
MSNFIVKKVAVLGAGVMGAQIAAHCINAKVPVVLFDLPAKEGPKNGIVQRAIENLKKLSP
APLGNKDDAALIQVANYEDDIELLKGCDLIIEAIAERMDWKHDLYKKVAPHIAPNAIFAS
NTSGLSITALSEGFDAELKARFCGVHFFNPPRYMHLVELIPTATTNPEILNQLEAFLTTT
LGKGVVRAFDTPNFVANRVGVFGILATVIEAEKYGLSVDVVDDLTGAKLGRAKSGTFRTA
DVVGLDTMGHVIKTMQDNLKDDPFFSSYATPPLLAKLVEQGALGQKSGAGFYKKVGKDIL
RIDPAKGDYVPGGGKADDIIARILKEKDPVKRMKALHDSTNPQGQFLWAIFRDAFHYIAV
HLETVADNARDLDFAMRWGFGWSVGPFETWQASGWQQVATWIKEDIEAGKALSTAPLPAW
VFDGREGVHSAQGSYSPSKKANVARSELPVYQRQAFRAPLVGEGAADGKTAGTTFFEDDS
VRIWHQNDDVLILSFKTKMHVIGQGVIDGMNKAIDEAEKNFKGLVIWHADAAEGGAFSAG
ADLQSMLPLFMSGGVKAIEPVVHHLQQAHQRLKYANVPVIAAVAGLALGGGCELLLHTAK
RVASIESYIGLVEVGVGLIPAGGGLKEAAVRAAKEAKGNDILQFLKDYMLAAATANVSKS
ALEARKLGYLKADDVIVFNPYELLHVAKVEARAMFDSGYRPALAPQVSVVGRYGVGTIMA
QLVNMRDGGFISAHDFKLGQMIAEIVSGGEVEEGSVVNEQWLLDLERKAFMELLNHPKTQ
ERIMGMMQTGKPVRN
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
gtgtccaacttcatcgtcaaaaaagtagccgttctcggcgcgggtgtgatgggcgcccag
attgcagcgcactgcatcaatgccaaagtgccggtcgtcctgttcgacctgccggccaag
gaaggcccaaagaatggcatcgttcagcgcgccattgaaaacctgaaaaagctcagcccg
gcgcccttgggcaacaaggatgacgccgccctgatccaggtcgccaactacgaagacgac
atcgaattgctcaagggctgcgatctgatcatcgaagccatcgccgagcgcatggactgg
aagcacgacctgtacaagaaggtcgctccgcacatcgcgccgaacgcgatcttcgcctcc
aacacttctggcctgtcgatcaccgccttgtccgaaggctttgatgccgaactcaaagcg
cgtttctgcggcgtgcatttcttcaacccgccgcgctacatgcacctggtcgaactgatc
ccgaccgccaccaccaatcctgaaatcctcaatcagctcgaagccttcctgaccaccacg
ctgggcaagggcgtcgtacgtgctttcgatacgcctaacttcgtggcaaaccgcgttggc
gtgttcggcatcctggcgacggtcatcgaagcagaaaaatacggcttgtcggttgacgtc
gtcgacgatctgaccggcgccaagctgggccgcgccaagtcgggcaccttccgcactgcg
gacgtggtcggtctggacaccatgggccacgtcatcaagaccatgcaagacaacctgaag
gacgatccgttcttctcgtcgtatgcgacgccgccattgctggcgaagctggtcgagcaa
ggcgcgttgggccagaagagcggcgccggtttctacaagaaggtcggcaaggacatcctg
cgcatcgatccggccaagggcgactacgtcccgggcggtggcaaggctgacgacatcatt
gcgcgcatcctgaaagaaaaagatccagtcaagcgcatgaaggcgctgcacgattcgacc
aacccgcaaggccagttcctgtgggcgatcttccgcgatgccttccactacatcgccgtg
catctggaaactgtcgccgacaatgcgcgcgacctcgattttgcgatgcgctggggcttc
ggctggagcgtcggtccgttcgagacatggcaggcttccggctggcagcaagtcgcgacc
tggatcaaggaagacatcgaggccggcaaggcactgtcgacagcaccgctgccggcgtgg
gtgtttgacggccgtgaaggcgtacacagtgcacaaggctcttactcgccatcgaagaag
gccaacgtcgcccgttccgaactgccggtctatcaacgccaggcgttccgcgcaccgctg
gtcggcgaaggcgctgccgacggcaagactgcaggcaccaccttcttcgaagacgactcg
gtccgtatctggcatcaaaacgacgacgtcctgattctgtccttcaagaccaagatgcac
gtcatcggccagggcgtcatcgacggtatgaacaaggccatcgacgaagccgagaaaaac
ttcaagggcctggtgatctggcacgcagacgcagccgaaggcggcgcgttctcggccggg
gccgacttgcaatcgatgctgccgctgttcatgtccggcggtgtcaaggccatcgagccg
gtcgtgcatcatctgcaacaggcgcatcaacgcctgaagtacgccaacgtcccggtcatc
gctgcggttgctggtctggcgctgggcggcggttgtgaattattgctgcataccgcgaag
cgtgtggcttcgatcgagtcttatattggcctggtggaagtcggcgtcggcctgattccg
gccggcggcggcctgaaggaagcggccgtgcgcgccgccaaggaagccaagggcaacgac
attctgcaattcctgaaggactacatgctggccgcggccaccgccaacgtctccaagtcg
gcgctggaagcacgcaagctcggctacctcaaggcggatgacgtcatcgtcttcaatcct
tacgaattgctgcatgtggccaaggtcgaggcgcgcgcgatgttcgactccggttaccgt
ccggcgctggcgccgcaagtctcggtggttggccgctacggcgtcggcaccatcatggcg
caactggtcaacatgcgcgacggtggctttatctcggcacacgacttcaagctgggccag
atgatcgccgaaatcgtcagtggcggtgaagtcgaagagggcagcgtggtcaacgagcaa
tggttgctggatctggagcgcaaagcgttcatggaactgctgaaccatccgaagacccag
gaacgaatcatggggatgatgcagaccggcaagccggttcgtaactaa
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