Herbaspirillum sp. meg3: hmeg3_23300
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Entry
hmeg3_23300 CDS
T05024
Name
(GenBank) PAS domain S-box protein
Organism
hee
Herbaspirillum sp. meg3
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
CHASE
PAS_9
PAS_3
PAS_4
PAS_8
PAS
Motif
Other DBs
NCBI-ProteinID:
ASU40942
UniProt:
A0A223PFU8
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Position
complement(5164602..5167463)
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AA seq
953 aa
AA seq
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MYKTIKRVGSSISVSLTLIIGFGATALLFLGTSKLEDDAFNKDFERRASLRVTTLQRGLE
EAVQVLTVINRLFATVDNPTRDQFHTFTDPLLQKYPHVQAFSFQRFVMRGERYAFEAAMQ
PRYPQFGITTLVEGKTIPAPLRDRYLVVDYLEPMQGNQAALGLDLSANQLVMDTLQRAIE
TNSPVSTGALRLAQASTNERGLLVLMPVYRHGMPLTTAAERRAAVIGDTTAVFNARVLLE
RIFNSFGPIRREGLEVSVYLGTSASREDLVYRTDDVRREAIVPGLPSWLGYRRPVHVRRT
FDIAGQPWHLEVKSAPIPLTSNHSNSLLILGAGTLLTLLAAAYLYTLSMRSRRIQRTVDE
RTAELRLTNVLLKEDIHARQQAERALQLRQRAIEASANAIIIMRANAPDYPIEYVNPAFE
RITGYSTAEVGGRSIRMLEGPDVDKQGFIDIWSALNEQRECNVVLRTNNKDGALMWNDFY
IAPVKSEEGKVTHFVAALYDITSMKRYEAELEFQANRDVLTGLVNRNMLRKVLEEAMAYA
ERYQRSLWVVFVDLDRFKFVNDTLGHKAGDLLLKTVAGRLRGAVRDTDTIARLGSDEFVI
VMSEYTDVGLDTRNLQRIQAAIAAPMTIEGHTFFPTCSLGVAAYPDDGRDAEMLVKHADI
AMYRAKQSGRDNYQFYTPAMNEQALERLRIEGDLRLALERNEFLLHYQPKIDLRSGNIVG
MEALIRWQHPELGMVSPVRFISLAEETGLILPIGSWVIRTACEQTKAWQDAGWGKLRVSV
NLSVRQFVQKDLVSSIAAVLKDTGLDADLLELELTESLVMTDVDHAIGILRQLKELGVHL
SIDDFGTGYSSLSYLKRFPIDVLKIDKSFVRDITVDADDAAITVSIISLAHSLKLHVIAE
GVETQEQLSYLRRHGCDEMQGYLFSPPVPAEQFETLLQQKVDLMKSALVSSSR
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgtacaaaacgatcaaacgcgtggggtcgtccatctcggtgtctttgacactgatcatc
ggatttggggcgacagcattgttgttcctgggaaccagcaagctggaagatgacgcgttc
aataaggatttcgaacggcgtgcgtccttgcgtgtgactactttacagcgcgggctggaa
gaggcggtgcaggtcttgacggtgatcaaccgtctgttcgccactgtcgataatcctacc
cgcgaccagtttcataccttcaccgatccgctgctgcaaaaatatccgcacgtacaggct
ttcagttttcaacgcttcgtgatgcgtggagagcgttacgcttttgaagcggcaatgcag
ccgcgctatccccaatttggcatcaccacgctcgtggaaggcaagaccattcccgcgcca
ttgcgcgaccgttatctggtggtggattatctggaacccatgcagggcaatcaggctgcg
cttggtctggatctctccgccaatcagctggtcatggatactttgcagcgcgccatcgag
accaacagccccgtatcgaccggcgccttgcgactcgcacaggcatcgaccaatgaacgc
gggttgctggtattgatgccggtttaccgtcacggcatgccgctgactacggcggcagaa
cgtcgcgccgccgttatcggcgacaccacggccgtattcaatgcgcgtgtcctgctggag
cggattttcaattccttcggaccgatccggcgtgaagggctggaagtcagcgtctatctc
ggcaccagcgccagccgggaagatctggtctatcgcaccgatgacgtccggcgcgaggcg
atcgtgccgggcttgccgagctggctgggataccgtcgtccggtgcatgtgcggcgcacc
ttcgatatcgccggccagccctggcatctggaggtgaagtcggcgccgattccactgaca
tccaatcattccaattcgctgttgatcctcggcgcaggcaccttgctgactttactggca
gctgcatatctttatacgctgtcgatgcgctcgcgccgcattcagcgcaccgttgacgaa
cgcaccgccgagctgcggctgaccaacgttctgctcaaggaagatatccacgcgcgtcag
caggccgagcgcgccttgcaactgcgtcagcgcgccatcgaagccagcgccaacgccatc
atcatcatgcgggcgaatgcgccggactatccgattgaatacgtcaatccggcgttcgag
cgcattaccggctatagcaccgctgaagttggcggccgcagcatccgcatgctggaaggc
ccggatgtcgacaagcaaggtttcatcgatatctggagcgcactgaacgaacaacgtgag
tgcaacgtcgtcctgcgcaccaacaacaaggatggcgcgctgatgtggaacgacttctac
attgcgccggtgaaaagcgaggaaggcaaggtgacccactttgtcgccgcgctctacgac
atcacatcgatgaagcgttacgaggccgagctggaattccaggccaatcgcgacgtcctc
accgggctggttaatcgcaacatgctgcgcaaggtgctggaagaagcgatggcttacgca
gagcgctaccagcgctcgctgtgggtggtgttcgttgatctggatcgcttcaagttcgtc
aacgatacactcggtcacaaggccggcgacttgttgttgaagaccgttgcgggacgcctg
cgcggcgcggtgcgcgacaccgatacgattgcgcgcctgggcagcgatgagtttgtcatc
gtcatgtcggaatacaccgatgtcggtctcgacacccgtaacctgcaacgcattcaggct
gccatcgccgcgccgatgacgatcgagggacatactttctttccgacgtgcagcctgggt
gtggcggcctatccggacgacgggcgcgatgccgagatgctggtcaagcacgccgacatc
gccatgtaccgtgccaagcaaagcggtcgtgacaactatcagttctacacaccggcgatg
aacgagcaggcgcttgaacgcctgcgcatcgaaggcgacctgcgcctggcgctggaacgc
aacgaatttctgctccactaccagccgaagatcgacctgcgcagcggcaacatcgtcggc
atggaagcactgatccgctggcagcatccggaactcgggatggtatcgccggtgcgtttc
atcagcctggccgaagagaccggcttgatcctgccgatcggttcctgggtgatccgaact
gcctgcgaacagaccaaagcctggcaagacgccggctggggcaagctgcgcgtgtcggtg
aatctgtcggtgcgccagttcgtgcaaaaggatctggtgtcttctatcgcagccgtgctg
aaagacaccgggcttgatgccgatctgctggagctggaactgaccgaaagcctggtgatg
accgatgtcgatcacgccatcggcatcctgcgccagctcaaggagttgggggtgcatctg
tccattgacgatttcggtacggggtattccagcctgtcttatctcaagcgattcccgatt
gacgtgctcaagatcgacaagtccttcgtgcgtgacatcaccgttgacgccgacgacgcc
gccatcacggtgtcgatcatttcactggcgcatagtctcaagctgcatgtcattgccgaa
ggcgtggagacgcaggagcagttgtcctatctgcgccgccatggctgcgacgaaatgcag
ggatatctgttcagcccgccggtgccggccgaacagtttgagacactgctgcagcaaaaa
gttgatctcatgaagagtgctttggtgagcagctctcgctaa
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