Herbaspirillum sp. meg3: hmeg3_24270
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Entry
hmeg3_24270 CDS
T05024
Name
(GenBank) DNA polymerase III subunit beta
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
hee
Herbaspirillum sp. meg3
Pathway
hee03030
DNA replication
hee03430
Mismatch repair
hee03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hee00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
hmeg3_24270
03430 Mismatch repair
hmeg3_24270
03440 Homologous recombination
hmeg3_24270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hee03032
]
hmeg3_24270
03400 DNA repair and recombination proteins [BR:
hee03400
]
hmeg3_24270
Enzymes [BR:
hee01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
hmeg3_24270
DNA replication proteins [BR:
hee03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
hmeg3_24270
DNA repair and recombination proteins [BR:
hee03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
hmeg3_24270
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_beta_2
DNA_pol3_beta
DNA_pol3_beta_3
Motif
Other DBs
NCBI-ProteinID:
ASU41108
LinkDB
All DBs
Position
5398240..5399346
Genome browser
AA seq
368 aa
AA seq
DB search
MQLVKTQRDTLLRPLQIVSGIVERRHTLPILANILIRKDGEKVSFLSTDIEVQITTHAEV
GSGSEATATTVAARKLLDILRALPDSGEVTVTLSNKRLTVQSGKSRFALQTLAAEEFPTV
AQAEHYNAQVTLPQKTLKHLFNMVHFSMAQQDIRYYLNGLLLVVEGKNVIAVATDGHRLA
FCQVATEQEFPRQEVIIPRKTIIELQRLLDESDEPVQLEIANNQVKLTFADIELISKLVE
GKFPDYTRVVPKGYKNNFTIGREQLLRSLQRAAIMTSDKFKGVRWVIAPGSLKISSTNAD
QEEAVEELEIDYGGDSVDIGFNVTYLLDVLNNLKGDYVNIALGDANSSALITIPDNADFK
YVVMPMRI
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgcaattggtcaaaacccaacgagatacgcttctccggccactgcaaatagtgagtggt
attgtcgagcgtcggcacacattgccgattctggccaatatcctcattcgcaaggacggc
gaaaaagtgtctttcctgtcgaccgacatcgaagtgcagatcaccacgcacgccgaagtc
ggctccggtagcgaagccaccgccaccaccgtcgccgcgcgcaaactgctcgacattctg
cgcgccctgcccgattcgggcgaagtgacggtcactctgtccaacaagcgcctgacggtg
caatccggcaagtcgcgttttgctctgcaaacgctggccgccgaagaattcccgaccgtc
gcccaggccgagcactacaacgcgcaagtcacgctgccgcaaaagaccctgaagcacctg
ttcaacatggtccacttctcgatggcgcagcaagacatccgttactacctcaacggcctg
ctgctggtcgtcgaaggcaagaacgtcatcgccgttgccaccgacggtcaccgtctggct
ttctgccaggtcgcgaccgagcaagaattcccgcgccaggaagtcatcatcccgcgcaag
accatcatcgaactgcagcgtctgctggacgaaagcgacgagccagtccaactggaaatc
gccaacaaccaagtcaagctgactttcgccgatatcgaactgatctccaagctggtcgaa
ggcaagttccccgactacacccgcgtggtgccgaagggctacaagaacaacttcaccatc
ggccgcgaacaactgctgcgctcgctgcaacgtgcagcgatcatgaccagcgacaagttc
aagggcgtgcgttgggtgattgcaccaggcagcctcaagatcagttccaccaatgccgac
caggaagaagcggttgaagaactcgaaatcgactacggcggcgacagcgtcgacatcggt
ttcaacgtcacctacctgctcgacgtgttgaacaacctcaagggcgactacgtcaacatc
gccctgggcgacgccaactcctccgcattgatcaccattcccgacaatgccgatttcaaa
tacgtcgtcatgccgatgcgcatttga
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