Herbaspirillum sp. meg3: hmeg3_24550
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Entry
hmeg3_24550 CDS
T05024
Name
(GenBank) spermidine/putrescine ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
hee
Herbaspirillum sp. meg3
Pathway
hee02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hee00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
hmeg3_24550
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hee02000
]
hmeg3_24550
Transporters [BR:
hee02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
hmeg3_24550
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
SBP_bac_11
SBP_bac_1
Motif
Other DBs
NCBI-ProteinID:
ASU41158
LinkDB
All DBs
Position
5453457..5454530
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AA seq
357 aa
AA seq
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MISLSSSFVRHTCTTAVAAALSLLAMSNAAQAADPKTLYIGMNGGNMEKTYTQFVFGPFE
QKNNVKVVVVPGGSSDILAKAQAAKDKPQMHLMFLDDGVMYRAIGMGLCEKQKPNPNLAG
ILPVAHIKGDMATGVTISMTGLAYNTKVYADKGWAPPTSWLDMADPKLKGKVVFQSLSSS
TFGLHAFLAFNKLKGGTDSNVEPGFTAWPKTVGPNVVEYIASSAKISEMAQTGEAALFPY
TPTQVTILKSKGIPVEYVHPKEGGVVLMVAQCVIANNSEPQLAQELAAYLLSPEAQGKAL
ENGSFNPTNTKVQVTGAAAAEQKRLNDYVKNSRNVDWDEVNKNRAVWNTRWNRTIER
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgatttcgctttcatcttctttcgtccgtcacacctgtactacggcagtcgctgctgca
ctctcgctgctggcgatgagcaacgcggcgcaggccgccgatcccaagacgctctacatc
ggcatgaacggcggcaacatggagaagacctacacgcaattcgtgttcggtcccttcgag
caaaagaataacgtcaaggtggtggtcgtgccgggcggttcttccgacattctggccaag
gcgcaggccgccaaggacaagccgcagatgcacctgatgttcctcgatgacggcgtcatg
taccgcgccatcggcatgggcctgtgcgagaagcaaaaacccaatcccaacctcgccggc
atccttccggttgcgcacatcaagggcgacatggctaccggcgtcaccatcagcatgacc
ggtctggcctacaacaccaaggtctacgccgacaagggctgggcgccgccgacctcgtgg
ctggacatggccgatcccaagctcaagggtaaggtcgtgttccagtcgctgtcctcatcg
accttcggcctgcacgccttcctcgccttcaacaagctgaagggcggcaccgacagcaac
gtcgagccgggcttcaccgcctggccgaagaccgtcggccccaacgtcgtcgaatatatc
gccagctccgccaagatttctgaaatggcgcaaaccggcgaggctgccttgttcccctac
acgccgacccaggtcacgatcctgaagagcaagggcatcccggtcgaatacgtgcatccg
aaagaaggcggcgtggtcttgatggtggcgcaatgcgttatcgccaacaacagcgagccg
caactggcacaagagttggccgcgtatctgctgagcccggaagcacagggcaaggcgctc
gaaaacggcagcttcaatcccaccaacaccaaggtacaagtgaccggcgcagcggcggcg
gaacagaagcgtctgaacgactacgtgaagaactcacgcaacgtcgactgggatgaggtc
aacaagaatcgcgcggtgtggaatacgcgttggaatcggacgatcgagcgttaa
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