Helicobacter pylori F16: HPF16_0008
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Entry
HPF16_0008 CDS
T01910
Symbol
groEL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
hef
Helicobacter pylori F16
Pathway
hef03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hef00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HPF16_0008 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hef03019
]
HPF16_0008 (groEL)
03110 Chaperones and folding catalysts [BR:
hef03110
]
HPF16_0008 (groEL)
03029 Mitochondrial biogenesis [BR:
hef03029
]
HPF16_0008 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hef04147
]
HPF16_0008 (groEL)
Enzymes [BR:
hef01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
HPF16_0008 (groEL)
Messenger RNA biogenesis [BR:
hef03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
HPF16_0008 (groEL)
Chaperones and folding catalysts [BR:
hef03110
]
Heat shock proteins
HSP60 / Chaperonin
HPF16_0008 (groEL)
Mitochondrial biogenesis [BR:
hef03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
HPF16_0008 (groEL)
Exosome [BR:
hef04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
HPF16_0008 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
HPF16_0008 (groEL)
Exosomal proteins of breast cancer cells
HPF16_0008 (groEL)
Exosomal proteins of colorectal cancer cells
HPF16_0008 (groEL)
Exosomal proteins of bladder cancer cells
HPF16_0008 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
BAJ54605
LinkDB
All DBs
Position
complement(7434..9074)
Genome browser
AA seq
546 aa
AA seq
DB search
MAKEIKFSDSARNLLFEGVRQLHDAVKVTMGPRGRNVLIQKSYGAPSITKDGVSVAKEIE
LSCPVANMGAQLVKEVASKTADAAGDGTTTATVLAYSIFKEGLRNITAGANPIEVKRGMD
KAAEAIINELKKASKKVGGKEEITQVATISANSDHNIGKLIADAMEKVGKDGVITVEEAK
GIEDELDIVEGMQFDRGYLSPYFVTNAEKMTAQLDNAYILLTDKKISNMKDILPLLEKTM
KEGKPLLIIAEDIEGEALTTLVVNKLRGVLNIAAVKAPGFGDRRKEMLKDIAVLTGGQVI
SEELGLTLENAEVEFLGKAGRIVIDKDNTTIVDGKGHSHDVKDRVVQIKTQIASTTSDYD
KEKLQERLAKLSGGVAVIKVGAASEVEMKEKKDRVDDALSATKAAVEEGIVIGGGAALIR
AAQKVHLNLHDDEKVGYEIIMRAIKAPLAQIAINAGYDGGVVVNEVQKHEGHFGFNASNG
KYVDMFKEGIIDPLKVERIALQNAVSVSSLLLTTEATVHEIKEEKATPAMPDMGGMGGMG
GMGGMM
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagaaatcaaattttcagatagtgcaagaaaccttttatttgaaggcgtgaga
caactccatgacgctgtcaaagtaaccatggggccaagaggcaggaatgtgttgatccaa
aaaagctatggcgctccaagcatcaccaaagatggcgtgagcgtggctaaagagattgaa
ttaagttgcccggtagctaacatgggcgctcaactcgttaaagaagtagcgagcaaaacc
gctgatgctgccggcgatggcacgaccacagcgaccgtgcttgcttatagcatttttaaa
gagggcttgagaaacatcacggctggggctaaccctattgaagtgaaacgaggcatggat
aaagccgctgaagccattattaatgagcttaaaaaagcgagcaaaaaagtaggcggtaaa
gaagaaatcacccaagtagcgaccatttctgcaaactctgatcacaatattgggaaactc
atcgctgacgctatggaaaaagtgggtaaagacggcgtgatcaccgttgaagaagctaag
ggcattgaagatgaattagatatcgtagagggcatgcaatttgatagaggctatctctcc
ccttactttgtaacaaacgctgagaaaatgaccgctcaattggataacgcttacatcctt
ttaacggataaaaaaatctctaacatgaaagacattctcccgctactagaaaaaaccatg
aaagagggcaaaccgcttttaatcatcgctgaagacattgagggcgaagctttaacgact
ctagtggtgaataaattaagaggcgtgttgaatatcgcagcggttaaagctccaggcttt
ggggacagaagaaaagaaatgctcaaagacatcgctgttttaaccggcggtcaagtcatt
agcgaagaattaggcttgactttagaaaacgctgaagtggagtttttaggcaaagccgga
aggattgtgattgacaaagacaacaccacgatcgtagatggcaaaggacatagccatgat
gttaaagacagagtcgtgcaaatcaaaacccaaattgcaagcacgacaagcgattatgac
aaggaaaaattgcaagaaagattggctaaactctctggcggtgtggctgtgattaaagtg
ggtgctgcgagtgaagtggaaatgaaagagaaaaaagaccgggttgatgacgcattgagc
gcgactaaagcggctgttgaagaaggcattgttattggcggcggtgcggctctcattcgc
gcggctcaaaaagtgcatttgaatttacacgatgatgaaaaagtgggctatgaaatcatc
atgcgcgccattaaagccccattagctcaaatcgctatcaatgccggttatgatggcggt
gtggtcgtgaatgaagtgcaaaaacacgaagggcattttggttttaacgctagcaatggc
aagtatgtggatatgtttaaagaaggcattattgaccccttaaaagtagaaaggatcgct
ttacaaaatgcggtttcggtttcaagcttacttttaaccacagaagccaccgtgcatgaa
atcaaagaagaaaaagcaaccccagcaatgcctgatatgggtggcatgggtggtatggga
ggcatgggcggcatgatgtaa
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