Helicobacter pylori F16: HPF16_0052
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Entry
HPF16_0052 CDS
T01910
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
hef
Helicobacter pylori F16
Pathway
hef03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hef00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HPF16_0052 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hef03400
]
HPF16_0052 (ung)
Enzymes [BR:
hef01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
HPF16_0052 (ung)
DNA repair and recombination proteins [BR:
hef03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HPF16_0052 (ung)
Prokaryotic type
HPF16_0052 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
BAJ54649
LinkDB
All DBs
Position
60556..61257
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AA seq
233 aa
AA seq
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MKLFDCAPLSLAWREFLQSEFKKPYFLEIEKRYLEALKSPKTIFPKSSNLFYALNLTPPS
AVKIILLGQDPYHSTYQENQQELPVAMGLSFSVEKNAPIPPSLKNIFKELHANLGVPVPC
CGDLSAWAKRGMLLLNAILSVEKNQAASHKRIGWEAFSDQILMRLFEANAPLIVVLLGKI
TQKKIALIPKNKHIIITAPHPSPLSRGFLGSGVFTSIQNAHREIYHKDFDFSL
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgaagctttttgactgcgctcctttaagtttggcttggcgggagtttttgcaaagcgaa
tttaaaaagccttattttttagaaatagaaaaacgctacttagaggctctaaaaagccct
aaaaccattttccccaaaagctctaatctgttttatgcgctcaatctaacgccccctagc
gcggttaaaatcatccttttagggcaagatccctaccattccacctaccaagaaaatcag
caagaattgcctgtggcgatgggcttaagctttagcgtggaaaaaaacgcccccatcccc
ccaagcttaaaaaatatttttaaagaattgcatgcgaatttaggcgtgcctgtgccttgt
tgtggggatttgagcgcatgggctaaaaggggcatgctgttgttgaacgccattttaagc
gtggaaaaaaaccaagccgcttcgcacaaacgcatcggctgggaagcttttagtgatcag
atattgatgcgcctttttgaagccaatgcccccttgatcgtggtgctgttaggaaagatc
acccaaaaaaagatcgctctaatccccaaaaacaaacacatcatcatcaccgcccctcac
cctagcccattatctagggggtttttagggagtggggtttttacaagcatccaaaacgcc
cacagagaaatttaccataaggattttgattttagtttatga
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