Helicobacter pylori F16: HPF16_0117
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Entry
HPF16_0117 CDS
T01910
Symbol
cpdB
Name
(GenBank) 2',3'-cyclic-nucleotide 2'-phosphodiesterase
KO
K01119
2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:
3.1.4.16
3.1.3.6
]
Organism
hef
Helicobacter pylori F16
Pathway
hef00230
Purine metabolism
hef00240
Pyrimidine metabolism
hef01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hef00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
HPF16_0117 (cpdB)
00240 Pyrimidine metabolism
HPF16_0117 (cpdB)
Enzymes [BR:
hef01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.6 3'-nucleotidase
HPF16_0117 (cpdB)
3.1.4 Phosphoric-diester hydrolases
3.1.4.16 2',3'-cyclic-nucleotide 2'-phosphodiesterase
HPF16_0117 (cpdB)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
5_nucleotid_C
Metallophos
PGA_cap
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
BAJ54714
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All DBs
Position
complement(120811..122556)
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AA seq
581 aa
AA seq
DB search
MKKLVLIIFLTLTLSISAKEVKIVFLETSDIHGWLFSYDYATGEQKPNNGLTRIATLIKK
QRAENKNVVLIDSGDLLQGNSTELFNDEPIHPLVLAENDLKFDIRVLGNHEFNFSKDFLE
KNIKGFNGDVVNANIIKTADNQPFVKPYAIKKIDGVRVAIVGYVVPHIPTWEASTPEHFA
GLEFLDAEEALKKTLKELKGKYDILIGAFHLGREDEKGGDGVPDLAKKFPQFDIIFAGHE
HAVYNTKIGKVHTIEPGAYGAYLAKGVVVFDTKTKKKIITTENLPTKGVPEDEELAKKYE
YVDKKSKEYANEVVGEVTKTFIDRPDFITGEEKITTMPTAALQETPVIELINKVQKYYAK
ADVSAAALFNFGANLKKGPFKRKDVAYIYKFANTLIGVNITGENLLKYMEWSYQFYNQLQ
PGDLTISFNENIRGYNFDMFSGVKYQVDVTKPAGSRIINPTINNKPIDPKAIYKLAINNY
RFGTLSKTLNLVTDANRYYNSYDGLQDNRQIRDLIIKYITEEKGGKVTPELEHNWEIINY
DFKNPLLEKLREKLKEGSIKIPTSKDARTLNVKSIKESEVK
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaattggttttaatcatcttcttaacgctaacgctttcaatatctgcaaaagaa
gtaaaaatagtgtttttagaaacttcagacattcatgggtggcttttttcgtatgattat
gcgactggcgagcaaaaacccaataatggcttgacaaggattgcgaccttaatcaaaaag
caaagggctgagaataaaaatgtggttttgattgacagcggggatttgttgcagggtaat
agcacggagttgtttaatgatgagcctatccacccgctagttttagccgagaatgatttg
aaatttgatattcgtgtgcttgggaatcacgagtttaatttcagcaaagattttttagag
aaaaatattaaggggtttaatggcgatgttgtgaatgcaaatatcatcaaaactgcggac
aatcagccgtttgtaaaaccttatgcgatcaagaaaattgatggcgtgagggtggcaatt
gtggggtatgtggtaccgcacatccccacttgggaggcttctacgcctgaacattttgca
ggattggagtttttggacgctgaagaagcgttaaaaaagaccttaaaagagctaaaaggg
aagtatgatattttgattggcgcttttcatttggggcgagaagatgagaaaggtggcgat
ggagtccctgatttggcgaaaaaattcccgcaatttgacatcatttttgcagggcatgag
catgcggtttataacactaaaataggaaaggtgcataccattgagcctggagcgtatggg
gcttatctggcaaaaggcgtggtggtgtttgacaccaaaacgaagaaaaaaatcataacg
actgaaaatttacccacaaaaggcgtgccagaagatgaagaattagcgaaaaaatacgaa
tatgtggataaaaaatcaaaagaatacgctaatgaagttgtcggcgaagttacaaaaacc
tttattgacaggcctgattttatcacaggagaagaaaaaatcaccacgatgcccaccgcc
gcattgcaagaaacgccggtgatagaattgattaataaggtgcaaaaatattatgcaaaa
gccgatgtttcagcggcagccttattcaattttggcgccaatttgaaaaaagggcctttc
aaaagaaaagatgtcgcctatatttacaagttcgctaacacgctcattggggtgaatatt
acgggtgaaaatctgttgaaatacatggaatggtcgtatcaattctacaatcagttgcaa
ccaggagatttgacgatcagttttaatgaaaatattcgtggctataactttgatatgttt
tctggcgtgaaataccaagtggatgttacaaaacccgccggatcaaggattattaatccg
acgatcaacaacaaacccatcgaccccaaagcaatctataaattagcgatcaacaattac
cgatttgggacattatccaagacattaaatttggttacagacgctaacaggtattataat
tcttacgatggattgcaagataacaggcaaatacgggatttaatcatcaaatacatcacc
gaagaaaaaggcgggaaggtaacccctgaactggaacataactgggaaatcatcaactac
gatttcaaaaacccgttgttggaaaaattgagagaaaaattaaaagaggggagcatcaaa
atccccacttcaaaagacgcaaggactttgaatgtcaaatccattaaggaaagtgaagtt
aaataa
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