Helicobacter pylori F16: HPF16_0469
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Entry
HPF16_0469 CDS
T01910
Name
(GenBank) hypothetical protein
KO
K04485
DNA repair protein RadA/Sms
Organism
hef
Helicobacter pylori F16
Brite
KEGG Orthology (KO) [BR:
hef00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hef03400
]
HPF16_0469
DNA repair and recombination proteins [BR:
hef03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
HPF16_0469
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
DnaB_C
DUF7125
RecA_N
nSTAND3
AAA_14
Rad51
GvpD_P-loop
AAA_22
SLFN-g3_helicase
CHDII_SANT-like
Cnn_1N
AAA_25
Motif
Other DBs
NCBI-ProteinID:
BAJ55066
LinkDB
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Position
complement(479488..480660)
Genome browser
AA seq
390 aa
AA seq
DB search
MENLIVKSFLDYPQHIEDFLEDISLKSFTPFNQRLIKVLIGMNQRNQVPRLETIKLRIGE
KDFESEEFKRVLAADSYPDYLNLKSDFKTHLCFQMQEHLANKLKEATRKSEVFDYEFLNK
YINLGIVRNGKYFWEWEEYFKNKPPIEKISTGIDFLDSITEGGIELGQIVLLSGDPEAGK
TLLGVQFLMNAQQQHKVTYFRFEFSVRKHIETLKSKNFDIKAENYFIDDQSCELNDLISQ
IRSLAKEGHKVFLIDSQMKIQAPIVGRTIEEIETTKFNALSETARSLQVLIIFIVQNSKS
DSYTPIGSRKGGHEAHIMIRIERLKRNALNHIKNFVERSKHRRILILKNKQTGLSGYRYV
KNVDYRFFEVDHQDEPQTQQEEHDEYGSLI
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatttgatagtaaaaagttttttagactatccccaacacatagaggatttttta
gaagacatcagcctcaaaagctttacgccttttaatcaaaggctcataaaagttttaata
ggaatgaatcagcgcaaccaagtaccaaggcttgaaacgatcaagcttaggatcggcgag
aaggattttgaaagcgaagagtttaaacgcgttttagcagcggatagctatccggattac
ttgaacctaaagagcgattttaaaacgcatttgtgttttcaaatgcaagaacacctcgct
aacaaactcaaagaagccacgcgcaagagtgaagtttttgattacgagtttttgaataaa
tacattaacttaggaattgtaaggaatggtaagtatttctgggagtgggaagaatatttc
aaaaataagcctcccattgaaaagatctcaacaggtattgattttttagactctatcaca
gagggaggaatcgaattagggcaaatcgttttactgagcggagaccctgaagccggtaaa
acgcttctaggcgtgcagtttttgatgaacgcgcaacagcaacacaaagtaacttacttc
aggtttgaatttagcgttagaaagcatattgaaaccttgaaaagtaagaattttgatatc
aaagcggaaaactatttcatagacgatcaaagttgcgaacttaacgatctcatttctcaa
attcgatcgcttgctaaagaggggcataaggtttttttgatagacagccaaatgaagatc
caagcgcccatcgtgggaaggaccattgaagaaatagaaacgactaaatttaacgcttta
agtgaaaccgctaggagcttgcaagtgttgataatcttcatcgtgcaaaattcaaaaagc
gacagttatacgccaataggatcacgcaaaggcggtcatgaagcacatataatgattcgc
attgaaaggctaaagaggaacgccttaaaccacattaagaattttgttgaacgatccaag
catagaagaatcctcattctcaaaaacaagcaaaccggcttaagcggttaccggtatgtg
aagaatgttgattatcgtttttttgaagtggatcaccaagacgaaccacaaacacagcaa
gaagaacatgacgaatacgggagcttgatatga
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