KEGG   Helicobacter pylori F16: HPF16_0671
Entry
HPF16_0671        CDS       T01910                                 
Symbol
rnc
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
hef  Helicobacter pylori F16
Brite
KEGG Orthology (KO) [BR:hef00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    HPF16_0671 (rnc)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hef03019]
    HPF16_0671 (rnc)
   03009 Ribosome biogenesis [BR:hef03009]
    HPF16_0671 (rnc)
   03036 Chromosome and associated proteins [BR:hef03036]
    HPF16_0671 (rnc)
Enzymes [BR:hef01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     HPF16_0671 (rnc)
Messenger RNA biogenesis [BR:hef03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     HPF16_0671 (rnc)
Ribosome biogenesis [BR:hef03009]
 Eukaryotic type
  90S particles
   RNase
    HPF16_0671 (rnc)
 Prokaryotic type
  rRNA processing factors
   HPF16_0671 (rnc)
Chromosome and associated proteins [BR:hef03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     HPF16_0671 (rnc)
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm DSRM_2 DND1_DSRM
Other DBs
NCBI-ProteinID: BAJ55268
LinkDB
Position
675544..676263
AA seq 239 aa
MKNKHSQNSPYVTPNSSYITLEKALGYSFKDKRLLEQALTHKSCKLALNNERLEFLGDAV
LGLVIGELLYHKFYQYDEGKLSKLRASIVSAHGFTKLAKVIALQDYLRVSSSEEISKGRE
KPSILSSAFEALMAGVYLEAGLAKVRKITQNLLNRAYKRLDLEHLFMDYKTALQELTQAQ
FCVIPTYQLLKEKGPDHHKEFEMALYIQDKIYATAKGKSKKEAEQQCAYQALQKLKEAK
NT seq 720 nt   +upstreamnt  +downstreamnt
atgaaaaacaaacactctcaaaatagcccttatgtaactcctaatagctcttatataacg
ctagaaaaagctttggggtattcttttaaagacaagcgtttattggagcaagccttaacg
cataaatcatgcaagctcgctttgaacaatgagcgcttggaatttttaggcgatgcggtg
ttgggtttggtgataggggagttgctataccataaattctatcaatacgatgagggcaaa
ctctctaaattaagggcttctattgtgagtgcgcatggttttactaaattagcgaaagtg
atcgctttacaagattatttgcgcgtttcttcttctgaagaaatttctaaagggagagaa
aaaccctctattttatcaagcgcttttgaggctttaatggctggggtgtatttagaagcg
gggttagctaaggtgcgcaaaatcacacaaaatttactcaatcgcgcttacaagcgtttg
gatttggagcatttgtttatggactataaaaccgctttacaggaattaacccaagcgcaa
ttttgcgtgatccccacttaccaattactcaaagaaaaaggccccgatcaccataaagaa
tttgaaatggccctatacattcaagataaaatatacgcgaccgctaaaggcaaaagcaaa
aaagaagccgaacagcaatgcgcttatcaggcgcttcaaaaacttaaggaagcaaaatga

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