Helicobacter pylori F16: HPF16_0706
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Entry
HPF16_0706 CDS
T01910
Name
(GenBank) putative outer membrane protein
KO
K09953
lipid A 3-O-deacylase [EC:3.1.1.-]
Organism
hef
Helicobacter pylori F16
Pathway
hef00540
Lipopolysaccharide biosynthesis
hef01100
Metabolic pathways
Module
hef_M00867
KDO2-lipid A modification pathway
Brite
KEGG Orthology (KO) [BR:
hef00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
HPF16_0706
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
hef01005
]
HPF16_0706
Lipopolysaccharide biosynthesis proteins [BR:
hef01005
]
Lipid A
HPF16_0706
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxR
Motif
Other DBs
NCBI-ProteinID:
BAJ55303
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All DBs
Position
715935..716936
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AA seq
333 aa
AA seq
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MFFKFVLCLLLGTFAWAKEDILTPLTPSKRYSINLMTENDGYINPYIDEYYTAGNQIGFS
TKEFDFSKNKAMKWTSYLGFFNKSPRVTRFGISLAQDMYTPSLENRKLVHLHDNHPYGGY
LRVNLNVYNRHQTFMELFTLSLGATGQDSLAAQTQRLIHKWGHDPQFYGWNTQLKNEFIF
ELHYQLLKKVPLLKTRFFSMELMPGFNVELGNARDYFQLGSLFRAGYNLDADYGVNKVNT
AFDGGMPYSDKFSIYFFVGAFGRFQPLNIFIQGNSPETRGIANLEYFVYASEIGAAMMWR
SFRVAFTITDISKTFQSQPKHHQIGTLELNFAF
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
ttgtttttcaaatttgttttatgtttattattaggaacgtttgcatgggcaaaagaggat
attcttaccccattaacgccctctaaacgctattctatcaatttgatgactgaaaatgat
ggttatatcaacccttacattgatgagtattataccgcaggcaaccaaataggcttttct
actaaagagtttgatttttctaaaaataaagcgatgaaatggacttcgtatttagggttt
ttcaataaaagccctagggttacccgttttggcatttctctcgcccaagatatgtatacc
ccttcacttgaaaacagaaaactggtgcatttgcatgacaaccacccttatggggggtat
ttgagggtgaatttgaatgtgtataaccgccatcaaactttcatggagttattcacgctt
tctttaggcgcaacagggcaagattctttggccgctcaaacgcagcgtctcattcataaa
tggggccatgatccccaattttatggctggaacacacagctcaaaaacgaatttatcttt
gaattgcactaccaattgctcaaaaaagtcccccttttaaagactcgttttttttctatg
gagttaatgcctgggtttaatgtggaattgggtaatgcgagggattatttccaactcggc
tcgctctttagggctgggtataacttggacgctgattatggggtcaataaggtcaatacc
gcttttgatggaggcatgccttatagcgataaattttccatctatttttttgtaggggct
tttgggcgcttccaaccccttaacatcttcattcaaggcaatagccctgaaactaggggc
attgctaatttggaatactttgtttatgccagtgaaataggagcggctatgatgtggcgc
agctttagagtggcttttacgatcactgatattagtaaaacctttcaatcccagcctaaa
caccaccaaatcggcactttagaattgaatttcgccttttga
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