Helicobacter pylori F16: HPF16_0859
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Entry
HPF16_0859 CDS
T01910
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
hef
Helicobacter pylori F16
Pathway
hef00470
D-Amino acid metabolism
hef00550
Peptidoglycan biosynthesis
hef01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hef00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HPF16_0859 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HPF16_0859 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hef01011
]
HPF16_0859 (murD)
Enzymes [BR:
hef01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
HPF16_0859 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
hef01011
]
Precursor biosynthesis
Amino acid ligase
HPF16_0859 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
DUF3531
Motif
Other DBs
NCBI-ProteinID:
BAJ55456
LinkDB
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Position
complement(896450..897718)
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AA seq
422 aa
AA seq
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MKISLFGHGKTTLALGRFFRKNHNEVKFFDDQFTASFKDSEGFVCYPSKDFNPNDSQLEI
VSPGISFTHPLVIKAKHLVSEYDYINSLFDLVFTPTIISISGTNGKTTTTEMLTMLLEDF
KAVNGGNIGTPLIELFEKQSPLWVLETSSFSLHYTNKAYPLIYLLINVKADHLTWHCNFE
NYLNAKLKVLTLMPKTSLAILPLKFKEHSSVQNSQAQKIFFDKSEEVLERLKIPSNALFF
KGAFLLDAALALLVYEQFLKIKNLKWQDYRENALKRLNAFKVGSHKMEEFRDKQGRLWVD
DSKATNIDATLQALKTFKNQKIHLILGGDIKGVNLTPLFEEFKNYEVSLYAIGSSAFIIQ
ALALEFNVSCQVCLELEKAVQEIKSVLSQNEIALLSPSAASLDQFSSYKERGERFKAFVL
KD
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatctctttatttgggcatggcaaaaccactctagccctagggcgtttttttaga
aaaaaccataacgaagtcaaattttttgacgaccaattcactgcatcttttaaagatagc
gagggttttgtttgctatcccagtaaggatttcaaccctaatgattcccaactagagata
gtcagccctggcattagtttcacgcaccctttagtgataaaagccaagcatttagtgagc
gaatacgattatattaatagcttgtttgatttggttttcacgcctactataataagtatt
agcggcactaatggtaaaaccaccacgacagaaatgcttaccatgcttttagaagatttt
aaggctgtgaatggggggaatatcggcacgcccttgattgaattgtttgaaaaacaatcg
cccttgtgggtgttagaaacaagctctttttctttgcattacaccaataaggcttaccct
ttaatctacttgctcatcaatgtaaaagctgatcatttgacttggcattgcaattttgaa
aattatttgaacgctaaactcaaggttttaacattgatgcctaaaacttcgctcgctatc
ctccctttaaaattcaaagaacattcaagcgttcaaaactcgcaagcgcaaaaaatcttt
tttgacaaaagcgaagaggttttagagcgtttaaaaatcccttctaacgctctttttttt
aagggagcgtttttattagacgctgccttagcccttttagtttatgagcaatttttaaaa
ataaagaatttaaaatggcaagattatagagaaaacgcccttaaaagactgaacgctttt
aaagtcggctcgcataaaatggaagaatttagggataaacaagggcgtttgtgggtagat
gacagcaaagccacgaacattgatgccaccttgcaagccctaaaaacctttaaaaaccaa
aaaatccatttgattttagggggcgatattaaaggggtcaatttaacccccctttttgaa
gaatttaaaaattatgaagtaagcctttatgcgataggatcaagcgcttttatcatccaa
gccttagcgttagaatttaatgtttcttgtcaggtttgtttggagttagaaaaagcggtt
caagaaattaaaagcgttttatcgcaaaatgaaatcgctttgctttcccccagcgcggcc
agtttggatcaattttcttcgtataaagaaaggggtgaaagatttaaagcgtttgtttta
aaagattaa
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