Helicobacter pylori F16: HPF16_1036
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Entry
HPF16_1036 CDS
T01910
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
hef
Helicobacter pylori F16
Brite
KEGG Orthology (KO) [BR:
hef00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hef03016
]
HPF16_1036 (truA)
Enzymes [BR:
hef01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
HPF16_1036 (truA)
Transfer RNA biogenesis [BR:
hef03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HPF16_1036 (truA)
Prokaryotic type
HPF16_1036 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
BAJ55633
LinkDB
All DBs
Position
1092224..1092952
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AA seq
242 aa
AA seq
DB search
MRCFKATIAYDGAYFLGYAKQPNKLGVQDKIESALNALGIKSIVVAAGRTDKGVHANNQV
LSFYAPKHWNAAKLFYHLAPKLAPHIVLKKLEEKNFHARFDAQKRAYRYLLTKNLKTPFL
VPYIACGDYGSLDALNTALKQFTGKHDFSMFKKEGGATTNPKRAIFNAFAYKTFIAGHEC
VVFKIIGDAFLRSSVRLIIQACVQYSLEKITLAEIQAQIHNIKAAIRTPIMANGLYLHRV
YY
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atgcgttgttttaaggctactatcgcttatgatggggcgtattttttaggctatgccaaa
cagcctaacaaactcggcgttcaagataagatagagagtgctttaaatgcgctagggatt
aaaagcattgtggttgcagctgggcgcacggataagggcgtgcatgcgaacaatcaagtg
ctgtctttttacgctccaaaacactggaatgccgctaaattattttatcatctagcccct
aaactcgccccgcatattgtcttaaaaaagctagaagaaaaaaacttccatgcgcgtttt
gacgctcaaaaaagagcgtatcgttaccttttgacgaagaatttaaaaacgcctttttta
gtgccttatatcgcttgtggggattatggctcactggatgcgttaaacaccgctttaaag
caattcacaggcaagcatgatttttccatgtttaaaaaagaaggtggggcgacaaccaat
cctaaacgcgctatttttaacgcttttgcttataaaacctttatcgcagggcatgagtgc
gtggtgtttaaaatcattggcgatgcgtttttgcgctctagcgtgcgtttgatcattcaa
gcgtgcgtccaatactccttagaaaaaatcacgctcgctgaaattcaagcgcaaatccac
aacatcaaagccgctataagaacgcccataatggctaatggcttgtatttacacagggtg
tattattga
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