Helicobacter pylori F16: HPF16_1121
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Entry
HPF16_1121 CDS
T01910
Name
(GenBank) hypothetical protein
KO
K14058
tRNA 2-thiocytidine biosynthesis protein TtcA
Organism
hef
Helicobacter pylori F16
Brite
KEGG Orthology (KO) [BR:
hef00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hef03016
]
HPF16_1121
Transfer RNA biogenesis [BR:
hef03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
HPF16_1121
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP_bind_3
Asn_synthase
NAD_synthase
DUF7411
QueC
MA3
Motif
Other DBs
NCBI-ProteinID:
BAJ55718
LinkDB
All DBs
Position
1187295..1188056
Genome browser
AA seq
253 aa
AA seq
DB search
MAYEISKKVLHIVGKTNATYKLIEEGDKVLLGLSGGKDSIMLACILARMQKHAPFKFDFK
AVTVHYGLGEDLKWLSDLCQEQGIEHEIIYTQIAATINEKRREKSSFCSFCSRLRRGTLY
SKALEEGYNKVAIAHHLDDAVESFFMNFTYNGSLRSMPPIYRAENGLLVIRPLIKVREAS
SIHFVTSQNIPVAPDCNCPAKQPTSDKPPIARLATKNFLKEMQNLHPHFFDSLENAFNNV
QANSFSDSKYLDA
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atggcctatgaaatttctaaaaaagtcttacacattgtgggcaagaccaacgccacttac
aaactcatagaagaaggcgataaagtcttattgggattgagtgggggcaaggattctatc
atgctcgcttgcatcttagccaggatgcaaaaacatgcccctttcaaatttgattttaaa
gcggttaccgtgcattatggtttgggcgaagatttgaaatggttgagcgatttgtgccaa
gagcaaggcattgagcatgagatcatttacacccaaatcgctgccaccatcaacgaaaaa
cgccgtgaaaaaagctcgttttgttcgttttgttctcgtttgaggagagggactttgtat
tctaaagctttagaagaaggctataataaagtcgctatcgcacaccatttagatgatgcg
gtggagagcttttttatgaatttcacttataacgggagtttaaggagcatgccccccatt
tatagggctgaaaacggcttattggtgatccgccctttgattaaggttcgagaagccagc
agcattcattttgtcacttctcaaaatatccccgtcgcccctgattgcaattgcccagcc
aaacagcccacctctgataagccccctatcgcgcgattagccactaaaaatttcttaaaa
gaaatgcaaaacttgcaccctcatttctttgacagcttagaaaatgcgtttaataatgtt
caagcgaacagctttagcgactctaaatatttagacgcttga
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