Helicobacter pylori F16: HPF16_1181
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Entry
HPF16_1181 CDS
T01910
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
hef
Helicobacter pylori F16
Pathway
hef03030
DNA replication
hef03430
Mismatch repair
hef03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hef00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HPF16_1181
03430 Mismatch repair
HPF16_1181
03440 Homologous recombination
HPF16_1181
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hef03032
]
HPF16_1181
03400 DNA repair and recombination proteins [BR:
hef03400
]
HPF16_1181
Enzymes [BR:
hef01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HPF16_1181
DNA replication proteins [BR:
hef03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HPF16_1181
DNA repair and recombination proteins [BR:
hef03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HPF16_1181
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DUF1877
Motif
Other DBs
NCBI-ProteinID:
BAJ55778
LinkDB
All DBs
Position
complement(1257314..1258336)
Genome browser
AA seq
340 aa
AA seq
DB search
MYRKDLDNYLKQRLPKAVFLYGEFDFFIHYYIQTISSLFKCNNPDTETSLFYASDYEKSQ
IATLLEQDSLFGGSSLVILKLDFALHKKFKENDINLFLKALERPSHNRLIIGLYNSKSDT
TKYKHTSDVIVKFFQKSPLKDEAIHARFFIPKAWESLKFLQERANFLHLDISGHLLNALF
ETNNEDLSVSFNDLDKLAILNAPITLEDIQELSSNAGDMDLQKLILGLFLKKSVLDIYDY
LLKEGKKDADILRGLERYFYQLFLFFAHIKTTGLMDAKEVLGYAPPKEIAENYAKNALRL
KEAGYKRVFEIFRLWHIQSMQGQKELGFLYLTPIQKIINP
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgtaaagatttggacaattatttaaaacaacgactccctaaagcggtgtttttg
tatggggagtttgatttttttatccattattacattcaaacgattagctcgctttttaaa
tgcaataaccccgacacagaaacttcgcttttttatgcgagcgattatgaaaaaagccag
attgcgacccttttagagcaggattctttatttggagggagcagtttagtcattttaaaa
ctggattttgccctgcataagaaatttaaggaaaatgacatcaatctttttttaaaagct
ttagagcggcctagccataataggcttatcatagggctttataattctaaaagcgacacc
acaaaatacaaacacactagcgatgttatcgttaaatttttccaaaaaagccccttgaaa
gatgaagcaatccatgcgcgcttttttatccctaaagcgtgggagagtttgaaattctta
caagaaagggctaattttttacatttagacatcagcggccatcttttaaacgctcttttt
gaaaccaataacgaagatttaagcgtttcgtttaacgatttagacaagctagcgatatta
aacgcgcccatcactttagaagacattcaagaattaagctccaatgcgggggatatggat
ttacaaaagctcattttagggctttttttgaaaaaaagcgtgcttgatatttatgattat
ttgttaaaagagggcaaaaaggatgcggatattttaagggggttagagcgctatttttac
cagctttttttatttttcgctcacattaaaacgaccggcttaatggatgctaaagaggtt
ttaggctacgctcctcctaaagagattgccgaaaattacgctaaaaacgccctgcgtttg
aaagaagccggctataagagggtttttgaaatttttaggttatggcacattcaaagcatg
caagggcaaaaggaattgggttttttgtatttgactcccattcaaaaaatcatcaaccct
tga
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