Helicobacter pylori F16: HPF16_1278
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Entry
HPF16_1278 CDS
T01910
Symbol
gmd
Name
(GenBank) GDP-D-mannose dehydratase
KO
K01711
GDPmannose 4,6-dehydratase [EC:
4.2.1.47
]
Organism
hef
Helicobacter pylori F16
Pathway
hef00051
Fructose and mannose metabolism
hef00541
Biosynthesis of various nucleotide sugars
hef01100
Metabolic pathways
hef01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
hef00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00051 Fructose and mannose metabolism
HPF16_1278 (gmd)
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
HPF16_1278 (gmd)
Enzymes [BR:
hef01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.47 GDP-mannose 4,6-dehydratase
HPF16_1278 (gmd)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
TPR_3
adh_short
Motif
Other DBs
NCBI-ProteinID:
BAJ55875
LinkDB
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Position
complement(1339544..1340689)
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AA seq
381 aa
AA seq
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MKEKIALITGVTGQDGSYLAEYLLNLGYEVHGLKRRSSSINTSRIDHLYEDLHSEHKRRF
FLHYGDMTDSSNLIHLIATTKPTEIYNLAAQSHVKVSFETPEYTANADGIGTLRILEAMR
ILGLEKKTRFYQASTSELYGEVLETPQNENTPFNPRSPYAVAKMYAFYITKNYREAYNLF
AVNGILFNHESRVRGETFVTRKITRAASAIAYNLTDCLYLGNLDAKRDWGHAKDYVKMMH
LMLQAPIPQDYVIATGKTTSVRDFVKMSFEFIGIDLEFQNTGIKEIGLIKSVDEKRANAL
KLNLSHLKTGQIVVRIDECYFRPTEVDLLLGDPTKAEKELGWVREYDLKELVKDMLEHDL
KECQKNLYLQDGGYILRNFYE
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaaaaaatcgctttaatcaccggggttaccgggcaagatgggagctatctggct
gaatacttgctgaatttgggttatgaagtgcatgggttaaaaaggcgctcttctagcatc
aacacttctaggatcgatcatctgtatgaagatttgcacagcgagcacaaaaggcgtttc
ttcttgcactatggggatatgaccgatagctctaatcttatccatttaatcgctaccact
aagcctacagagatttataatttagccgctcaaagccatgtgaaagtctcttttgaaacc
ccagaatacaccgctaacgctgatggtattggcacgctaaggattttagaagccatgcgg
attttaggattagaaaagaaaacacgattttatcaagccagcacgagcgaattgtatggt
gaagttttagagaccccacaaaatgaaaacaccccctttaacccacgaagcccctatgcg
gtcgctaaaatgtatgccttttacatcaccaaaaattacagagaggcctataacttgttt
gcggttaatggcattctttttaaccatgagagcagggtaaggggcgaaacttttgttact
cgtaaaatcacgcgagccgctagcgcgatagcgtataacttaacagattgcttgtattta
gggaatttagacgctaaaagagactgggggcatgccaaagattatgtgaaaatgatgcat
ttaatgctccaagcgcccattccgcaagattatgtgatcgctacaggtaagaccacaagc
gtgcgcgattttgtgaaaatgagctttgaatttatcggtattgatttagaatttcaaaat
acagggattaaagaaatcggtttgattaaaagcgttgatgaaaaaagagcgaacgcttta
aaattaaacttaagccatttaaaaacaggccaaatcgtggtgcgcatagacgagtgctat
ttcaggcctactgaagtggatttgcttttaggcgatcccactaaggcagaaaaagagcta
ggctgggttagggaatacgatttaaaagagttggttaaggacatgttagagcatgattta
aaagaatgccagaaaaacctttacttgcaagatgggggctatattttaaggaatttttat
gaatga
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