KEGG   Helicobacter pylori F16: HPF16_1405
Entry
HPF16_1405        CDS       T01910                                 
Symbol
ribD
Name
(GenBank) riboflavin biosynthesis protein
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
hef  Helicobacter pylori F16
Pathway
hef00740  Riboflavin metabolism
hef01100  Metabolic pathways
hef01110  Biosynthesis of secondary metabolites
hef01240  Biosynthesis of cofactors
hef02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:hef00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    HPF16_1405 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    HPF16_1405 (ribD)
Enzymes [BR:hef01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     HPF16_1405 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     HPF16_1405 (ribD)
SSDB
Motif
Pfam: dCMP_cyt_deam_1 RibD_C
Other DBs
NCBI-ProteinID: BAJ56002
LinkDB
Position
complement(1468581..1469615)
AA seq 344 aa
MKLYESLLEICLNKAWEHQTLALENPSVACMVLDKNHEILSLETHKKAKTPHAEVLAAKS
ALKILRPSLKNDLEKLEDPKTLSDFLKTHHDSAFKDCVFLITLEPCNSYGKTPACSGLLE
VLKPKRVVIATEENEAKKGGLARLQKARIEGVVCESLENKAKDLLLPFRTMEQKGRFNLF
KLALRMNGDYYHGKITGQKSVIFTHNQRAVCDTLIVSGKTIRTDNPLLDARFCDSFYQNK
NPNIAILSKHSIDPNSKVFSAPNRLVNVFYDPKDLPLEKGFNFIEGGWELFESLRDKIDA
LLLHSHASMISEAFNTIALKAPFKGRLLHAQILENEALLWIENS
NT seq 1035 nt   +upstreamnt  +downstreamnt
atgaaactttatgagagtttattagaaatttgcttgaataaggcatgggagcatcaaacc
ctagccctagaaaacccaagcgtggcttgcatggtgctagataaaaaccatgaaatcttg
agtttagaaacccacaaaaaagccaaaaccccgcatgcagaagtcttagccgctaaatca
gcgttaaagattttacgccccagtttgaaaaacgatttagaaaaattagaagaccctaaa
actttaagcgattttttaaaaacgcaccacgatagcgcttttaaagactgcgttttttta
atcaccttagagccatgcaattcttatggcaaaaccccggcgtgcagcgggttgttagaa
gttttaaagcctaaaagagtggtcattgccacagaagaaaacgaagcgaaaaaagggggt
ttagcaaggctacaaaaggctcgtattgaaggggtggtttgtgagagtttggaaaacaag
gctaaagacttgctcttgccttttaggacaatggaacaaaaggggcgttttaatttgttc
aaactcgctttaaggatgaatggggattattaccatggcaagatcaccgggcaaaaaagc
gttatttttacgcacaaccagcgagcagtatgcgacacgcttattgtttctgggaaaacc
ataagaacggataaccccttattggacgctcgcttttgcgatagcttttatcaaaataaa
aaccccaatatcgctattttatccaagcattcaattgaccccaattcaaaggttttttct
gcacctaatcgcttagttaatgttttctatgaccccaaagatttgcccctagagaagggg
tttaatttcattgaaggggggtgggaattgtttgagagcttgagggataaaatagacgca
ttgcttttgcattcgcatgcgtctatgattagcgaagcgtttaacacgatcgctctaaaa
gccccttttaaagggcggttgttacatgcacaaatcttagaaaatgaagcccttttatgg
atagaaaactcttaa

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