Helicobacter pylori F16: HPF16_1421
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Entry
HPF16_1421 CDS
T01910
Symbol
exoA
Name
(GenBank) exodeoxyribonuclease
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
hef
Helicobacter pylori F16
Pathway
hef03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hef00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HPF16_1421 (exoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hef03400
]
HPF16_1421 (exoA)
Enzymes [BR:
hef01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
HPF16_1421 (exoA)
DNA repair and recombination proteins [BR:
hef03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
HPF16_1421 (exoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
BAJ56018
LinkDB
All DBs
Position
complement(1492596..1493348)
Genome browser
AA seq
250 aa
AA seq
DB search
MKLISWNVNGLRACMTKGFMDFFNSVDADVFCIQESKMQQEQNTFEFKGYFDFWNCAIKK
GYSGVVTFTKKEPLSVSYGINMEEHNKEGRVVTCEFESFYLVNVYTPNSQQALSRLSYRM
SWEVEFKKFLKALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREKFNELLNA
GFIDTFRYFYPNKEKAYTWWSYMQQARDKNIGWRIDYFLCSNPLKTRLKDALIYKDILGS
DHCPVGLELV
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgaaattgatttcatggaatgtgaacgggttaagagcctgcatgactaagggctttatg
gattttttcaatagcgttgatgcggatgttttttgcattcaagaatctaaaatgcagcaa
gaacaaaacacctttgaatttaaagggtattttgatttttggaattgcgcgattaaaaag
ggctattctggggtggtaactttcactaaaaaagagcctttgagcgtgagctatggtatc
aatatggaagaacataacaaagaggggcgcgtggtaacttgcgaatttgagtcgttttat
ttagtgaatgtttatacccctaattcccaacaagccctatccaggcttagttatcgcatg
agttgggaagtggaatttaaaaaatttttaaaagctttagagttaaaaaaacctgtcatt
gtgtgcggggatttgaatgtggctcacaatgaaattgatttagaaaaccctaaaacaaac
cgaaaaaatgcgggctttagcgatgaagagagagagaaattcaacgagcttttgaacgcc
ggttttattgacactttccgttatttttaccctaacaaagaaaaggcttacacctggtgg
agctacatgcaacaagcaagggacaaaaacattggttggcgcattgattattttttatgc
tctaatcctttaaaaacgcgcttaaaagacgctttaatctataaagatattttagggagc
gatcattgcccggtagggttggaattagtctaa
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