Helicobacter pylori F16: HPF16_1443
Help
Entry
HPF16_1443 CDS
T01910
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
hef
Helicobacter pylori F16
Pathway
hef03030
DNA replication
hef03430
Mismatch repair
hef03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hef00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HPF16_1443 (dnaQ)
03430 Mismatch repair
HPF16_1443 (dnaQ)
03440 Homologous recombination
HPF16_1443 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hef03032
]
HPF16_1443 (dnaQ)
03400 DNA repair and recombination proteins [BR:
hef03400
]
HPF16_1443 (dnaQ)
Enzymes [BR:
hef01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HPF16_1443 (dnaQ)
DNA replication proteins [BR:
hef03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HPF16_1443 (dnaQ)
DNA repair and recombination proteins [BR:
hef03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HPF16_1443 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
BAJ56040
LinkDB
All DBs
Position
complement(1520809..1521672)
Genome browser
AA seq
287 aa
AA seq
DB search
MSDSLLHKDIQALIARLKHQDLSLGMLEKSLSRLIYDEINLEYLKACGLNFVETSENLIT
LKNLKTPLKDEVFSFIDLETTGSCPLKHEILEIGAVQVKGGEIINRFETLVKVKSVPDYI
AELTGIAYEDTLNAPSVHEALQELRLFLGNSVFVAHNANFDYNFLGRYFVEKLHCPLLNL
KLCTLDLSKRAILSMRYSLSFLKELLGFSIEVSHRAYADALASYKLFEICLLNLPSYIKT
TMDLIDFSKCANTLIKRPPRARHQETLAPFSLFERTKGLLNIIKATS
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacagcctcttgcataaagatattcaagccctaatcgctcgcttaaaacaccag
gatttaagcttaggcatgctagaaaaatcactctctcgccttatttatgatgaaatcaat
ttggaatatttaaaagcgtgcgggcttaatttcgtagaaacgagcgaaaatttaatcacg
ctcaaaaaccttaaaaccccccttaaagatgaggttttttcctttattgatttagagacc
accggctcttgccccctaaaacatgagattttagaaatcggagccgtgcaagtgaagggg
ggggaaatcatcaatcgttttgaaacccttgtgaaagtcaaaagcgttcctgattatatc
gctgagcttacaggcatcgcttatgaagacaccctaaacgctccaagcgtgcatgaagct
ttgcaagaattgcggctttttttaggcaatagcgtgtttgtagcccataacgctaatttt
gattacaactttttagggcgttattttgtagaaaaattgcattgccccttattgaattta
aagctttgcactttggatttatccaaacgagccattttgtccatgcgttattctttgagc
tttttaaaagagcttttagggtttagtatagaagtcagccatagagcctatgcggacgct
ttagcgagctataagctctttgaaatatgcttattaaacttgcccagttacatcaaaacg
acgatggatttgattgatttttccaaatgcgctaacaccttgatcaaaagacccccaaga
gccagacaccaagagactctagcgccattttctctttttgagaggacaaagggtttgtta
aatatcataaaagcaaccagttaa
DBGET
integrated database retrieval system
