Helicobacter pylori F16: HPF16_1485
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Entry
HPF16_1485 CDS
T01910
Symbol
rlpA
Name
(GenBank) rare lipoprotein A
KO
K03642
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
hef
Helicobacter pylori F16
Brite
KEGG Orthology (KO) [BR:
hef00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hef01011
]
HPF16_1485 (rlpA)
Enzymes [BR:
hef01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
HPF16_1485 (rlpA)
Peptidoglycan biosynthesis and degradation proteins [BR:
hef01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
HPF16_1485 (rlpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPBB_1
SPOR
Peptidase_C25
Motif
Other DBs
NCBI-ProteinID:
BAJ56082
LinkDB
All DBs
Position
complement(1561320..1562267)
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AA seq
315 aa
AA seq
DB search
MGLALERVCFLGVIFLISACAVKKEGVKNLSYKHESLRAYENAKDYDPTTKKATYKRNFF
ERHFKHHSNSQDGNTKDRPLDNGMRDSSAIQRATMRPYQVGNKWYYPTKVDLGEKFDGIA
SWYGPNFHAKKTSNGEIYNMYAHTAAHKTLPMNTVVKVINVENNLSTIVRINDRGPFVSD
RIIDLSNAAARDIDMVKKGTASVRLIVLGFGGVISKQYEQSFNASSSKILHEEFKVGESE
KSVSGGKFSLQMGAFRNQIGAQTLADKLQAENPNYSVKVAFKDDLYKVLVQGFQSEEEAR
DFMKKYNQNAVLTRE
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgggtttggcgttggaaagagtttgttttttaggcgttatttttttgattagtgcttgt
gcggttaaaaaagagggggtaaagaatttgtcttacaagcatgaaagcttgcgcgcttat
gaaaacgctaaagactatgacccgacaaccaaaaaagccacctataaacgcaattttttt
gaacgccatttcaaacaccactccaattcgcaagatggcaacacaaaagatcggccgcta
gataacggcatgcgcgattctagcgcgatccaaagagccaccatgcgcccttatcaagtg
gggaacaagtggtattaccccactaaagtggatttgggcgaaaaatttgatggcattgcg
agctggtatggccccaatttccatgccaaaaaaaccagtaatggggaaatttataacatg
tatgcccacaccgccgcgcacaaaactttacccatgaacaccgtggtgaaagtcatcaat
gttgaaaacaatttaagcaccattgtgcgcatcaacgatagagggccttttgtgagcgat
cgcatcattgatttgtctaatgcggccgctagagatattgacatggttaaaaaaggcaca
gccagcgtgcgtcttattgttttgggttttggtggggttatctccaagcaatacgagcaa
tcctttaacgccagctcttcaaagatcttacacgaggaatttaaagtcggcgagagcgaa
aaaagcgtgagcggagggaaattttctttgcaaatgggggcttttagaaaccaaataggc
gctcaaactttagcggataaattgcaagcagaaaatccaaattacagcgttaaggtcgct
tttaaagacgatttgtataaagttttagttcaagggtttcaaagcgaagaagaggctagg
gattttatgaaaaaatataaccagaatgcggttttaacgagagaatga
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